Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SPDYE4A6NLX3 AC135983.2-203ENST00000454486 1613 ntBASIC27.16■■□□□ 1.94
SPDYE4A6NLX3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SPDYE4A6NLX3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC27.16■■□□□ 1.94
SPDYE4A6NLX3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SPDYE4A6NLX3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.15■■□□□ 1.94
SPDYE4A6NLX3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SPDYE4A6NLX3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
SPDYE4A6NLX3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
SPDYE4A6NLX3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
SPDYE4A6NLX3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
SPDYE4A6NLX3 AC110285.7-201ENST00000624417 1536 ntBASIC27.15■■□□□ 1.94
SPDYE4A6NLX3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
SPDYE4A6NLX3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC27.14■■□□□ 1.94
SPDYE4A6NLX3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC27.14■■□□□ 1.94
SPDYE4A6NLX3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC27.14■■□□□ 1.94
SPDYE4A6NLX3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
SPDYE4A6NLX3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
SPDYE4A6NLX3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
SPDYE4A6NLX3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SPDYE4A6NLX3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SPDYE4A6NLX3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SPDYE4A6NLX3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
SPDYE4A6NLX3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SPDYE4A6NLX3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SPDYE4A6NLX3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SPDYE4A6NLX3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC27.11■■□□□ 1.93
SPDYE4A6NLX3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC27.11■■□□□ 1.93
SPDYE4A6NLX3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SPDYE4A6NLX3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC27.11■■□□□ 1.93
SPDYE4A6NLX3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SPDYE4A6NLX3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC27.1■■□□□ 1.93
SPDYE4A6NLX3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
SPDYE4A6NLX3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
SPDYE4A6NLX3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.09■■□□□ 1.93
SPDYE4A6NLX3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC27.09■■□□□ 1.93
SPDYE4A6NLX3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
SPDYE4A6NLX3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SPDYE4A6NLX3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SPDYE4A6NLX3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SPDYE4A6NLX3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC27.09■■□□□ 1.93
SPDYE4A6NLX3 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC27.09■■□□□ 1.93
SPDYE4A6NLX3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
SPDYE4A6NLX3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SPDYE4A6NLX3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
SPDYE4A6NLX3 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
SPDYE4A6NLX3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
SPDYE4A6NLX3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
SPDYE4A6NLX3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
SPDYE4A6NLX3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC27.07■■□□□ 1.92
SPDYE4A6NLX3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC27.07■■□□□ 1.92
SPDYE4A6NLX3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC27.07■■□□□ 1.92
SPDYE4A6NLX3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SPDYE4A6NLX3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
SPDYE4A6NLX3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
SPDYE4A6NLX3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC27.06■■□□□ 1.92
SPDYE4A6NLX3 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
SPDYE4A6NLX3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
SPDYE4A6NLX3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
SPDYE4A6NLX3 BX255925.1-201ENST00000566954 1854 ntBASIC27.06■■□□□ 1.92
SPDYE4A6NLX3 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SPDYE4A6NLX3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SPDYE4A6NLX3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
SPDYE4A6NLX3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
SPDYE4A6NLX3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
SPDYE4A6NLX3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC27.04■■□□□ 1.92
SPDYE4A6NLX3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC27.04■■□□□ 1.92
SPDYE4A6NLX3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
SPDYE4A6NLX3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
SPDYE4A6NLX3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC27.03■■□□□ 1.92
SPDYE4A6NLX3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
SPDYE4A6NLX3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
SPDYE4A6NLX3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC27.02■■□□□ 1.92
SPDYE4A6NLX3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC27.02■■□□□ 1.92
SPDYE4A6NLX3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
SPDYE4A6NLX3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
SPDYE4A6NLX3 AC091060.1-201ENST00000623524 1766 ntBASIC27.02■■□□□ 1.92
SPDYE4A6NLX3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.92
SPDYE4A6NLX3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
SPDYE4A6NLX3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
SPDYE4A6NLX3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
SPDYE4A6NLX3 AL033527.3-201ENST00000566366 1196 ntBASIC27.01■■□□□ 1.91
SPDYE4A6NLX3 AC148477.6-201ENST00000623746 465 ntBASIC27.01■■□□□ 1.91
SPDYE4A6NLX3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
SPDYE4A6NLX3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC27.01■■□□□ 1.91
SPDYE4A6NLX3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SPDYE4A6NLX3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SPDYE4A6NLX3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
SPDYE4A6NLX3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC27■■□□□ 1.91
SPDYE4A6NLX3 AC060814.1-201ENST00000554326 538 ntBASIC27■■□□□ 1.91
SPDYE4A6NLX3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SPDYE4A6NLX3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC27■■□□□ 1.91
SPDYE4A6NLX3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SPDYE4A6NLX3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SPDYE4A6NLX3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
SPDYE4A6NLX3 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC26.99■■□□□ 1.91
SPDYE4A6NLX3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.99■■□□□ 1.91
SPDYE4A6NLX3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.99■■□□□ 1.91
SPDYE4A6NLX3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.98■■□□□ 1.91
SPDYE4A6NLX3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms