Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
MBD3L4A6NDZ8 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.85■■□□□ 1.09
MBD3L4A6NDZ8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
MBD3L4A6NDZ8 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
MBD3L4A6NDZ8 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.85■■□□□ 1.09
MBD3L4A6NDZ8 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.85■■□□□ 1.09
MBD3L4A6NDZ8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
MBD3L4A6NDZ8 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MBD3L4A6NDZ8 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
MBD3L4A6NDZ8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MBD3L4A6NDZ8 LINC01003-201ENST00000564834 1764 ntBASIC21.84■■□□□ 1.09
MBD3L4A6NDZ8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.83■■□□□ 1.09
MBD3L4A6NDZ8 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
MBD3L4A6NDZ8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
MBD3L4A6NDZ8 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
MBD3L4A6NDZ8 SPCS2P3-201ENST00000500401 656 ntBASIC21.82■■□□□ 1.08
MBD3L4A6NDZ8 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.82■■□□□ 1.08
MBD3L4A6NDZ8 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
MBD3L4A6NDZ8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.82■■□□□ 1.08
MBD3L4A6NDZ8 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
MBD3L4A6NDZ8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
MBD3L4A6NDZ8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MBD3L4A6NDZ8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
MBD3L4A6NDZ8 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MBD3L4A6NDZ8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.81■■□□□ 1.08
MBD3L4A6NDZ8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
MBD3L4A6NDZ8 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.8■■□□□ 1.08
MBD3L4A6NDZ8 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.79■■□□□ 1.08
MBD3L4A6NDZ8 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.79■■□□□ 1.08
MBD3L4A6NDZ8 MIR6765-201ENST00000614092 87 ntBASIC21.79■■□□□ 1.08
MBD3L4A6NDZ8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.79■■□□□ 1.08
MBD3L4A6NDZ8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
MBD3L4A6NDZ8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MBD3L4A6NDZ8 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
MBD3L4A6NDZ8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.78■■□□□ 1.08
MBD3L4A6NDZ8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
MBD3L4A6NDZ8 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.78■■□□□ 1.08
MBD3L4A6NDZ8 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.78■■□□□ 1.08
MBD3L4A6NDZ8 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
MBD3L4A6NDZ8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
MBD3L4A6NDZ8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
MBD3L4A6NDZ8 AL449106.1-201ENST00000608517 1980 ntBASIC21.78■■□□□ 1.08
MBD3L4A6NDZ8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
MBD3L4A6NDZ8 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MBD3L4A6NDZ8 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.77■■□□□ 1.08
MBD3L4A6NDZ8 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
MBD3L4A6NDZ8 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MBD3L4A6NDZ8 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MBD3L4A6NDZ8 AC018755.3-202ENST00000596210 929 ntBASIC21.76■■□□□ 1.07
MBD3L4A6NDZ8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
MBD3L4A6NDZ8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
MBD3L4A6NDZ8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MBD3L4A6NDZ8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MBD3L4A6NDZ8 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
MBD3L4A6NDZ8 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
MBD3L4A6NDZ8 RARRES2P1-201ENST00000474487 481 ntBASIC21.75■■□□□ 1.07
MBD3L4A6NDZ8 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.75■■□□□ 1.07
MBD3L4A6NDZ8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
MBD3L4A6NDZ8 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MBD3L4A6NDZ8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.75■■□□□ 1.07
MBD3L4A6NDZ8 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.74■■□□□ 1.07
MBD3L4A6NDZ8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
MBD3L4A6NDZ8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MBD3L4A6NDZ8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MBD3L4A6NDZ8 AC074183.2-201ENST00000623112 922 ntBASIC21.74■■□□□ 1.07
MBD3L4A6NDZ8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MBD3L4A6NDZ8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MBD3L4A6NDZ8 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MBD3L4A6NDZ8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
MBD3L4A6NDZ8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MBD3L4A6NDZ8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MBD3L4A6NDZ8 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MBD3L4A6NDZ8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
MBD3L4A6NDZ8 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MBD3L4A6NDZ8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
MBD3L4A6NDZ8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MBD3L4A6NDZ8 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
MBD3L4A6NDZ8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.72■■□□□ 1.07
MBD3L4A6NDZ8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.72■■□□□ 1.07
MBD3L4A6NDZ8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.71■■□□□ 1.07
MBD3L4A6NDZ8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.71■■□□□ 1.07
MBD3L4A6NDZ8 BHLHE23-202ENST00000612929 1109 ntBASIC21.71■■□□□ 1.07
MBD3L4A6NDZ8 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MBD3L4A6NDZ8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
MBD3L4A6NDZ8 BX255925.1-201ENST00000566954 1854 ntBASIC21.71■■□□□ 1.07
MBD3L4A6NDZ8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.7■■□□□ 1.06
MBD3L4A6NDZ8 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.7■■□□□ 1.06
MBD3L4A6NDZ8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.7■■□□□ 1.06
MBD3L4A6NDZ8 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MBD3L4A6NDZ8 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
MBD3L4A6NDZ8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
MBD3L4A6NDZ8 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
MBD3L4A6NDZ8 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MBD3L4A6NDZ8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MBD3L4A6NDZ8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MBD3L4A6NDZ8 AC139795.1-202ENST00000500444 432 ntBASIC21.69■■□□□ 1.06
MBD3L4A6NDZ8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.69■■□□□ 1.06
MBD3L4A6NDZ8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
MBD3L4A6NDZ8 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MBD3L4A6NDZ8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms