Protein–RNA interactions for Protein: A2RU48

SMCO3, Single-pass membrane and coiled-coil domain-containing protein 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3A2RU48 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMCO3A2RU48 AC093323.1-202ENST00000635031 2045 ntBASIC19.74■□□□□ 0.75
SMCO3A2RU48 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMCO3A2RU48 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMCO3A2RU48 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMCO3A2RU48 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMCO3A2RU48 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SMCO3A2RU48 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SMCO3A2RU48 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
SMCO3A2RU48 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SMCO3A2RU48 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.73■□□□□ 0.75
SMCO3A2RU48 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMCO3A2RU48 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.72■□□□□ 0.75
SMCO3A2RU48 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SMCO3A2RU48 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMCO3A2RU48 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SMCO3A2RU48 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SMCO3A2RU48 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.71■□□□□ 0.75
SMCO3A2RU48 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.71■□□□□ 0.75
SMCO3A2RU48 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.71■□□□□ 0.75
SMCO3A2RU48 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMCO3A2RU48 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMCO3A2RU48 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.7■□□□□ 0.74
SMCO3A2RU48 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC19.7■□□□□ 0.74
SMCO3A2RU48 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMCO3A2RU48 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
SMCO3A2RU48 AP004609.3-201ENST00000610705 1884 ntBASIC19.7■□□□□ 0.74
SMCO3A2RU48 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SMCO3A2RU48 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SMCO3A2RU48 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SMCO3A2RU48 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMCO3A2RU48 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMCO3A2RU48 AC092803.2-201ENST00000564287 1899 ntBASIC19.69■□□□□ 0.74
SMCO3A2RU48 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMCO3A2RU48 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.69■□□□□ 0.74
SMCO3A2RU48 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.69■□□□□ 0.74
SMCO3A2RU48 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMCO3A2RU48 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMCO3A2RU48 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.69■□□□□ 0.74
SMCO3A2RU48 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMCO3A2RU48 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMCO3A2RU48 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SMCO3A2RU48 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SMCO3A2RU48 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SMCO3A2RU48 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SMCO3A2RU48 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SMCO3A2RU48 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SMCO3A2RU48 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC19.67■□□□□ 0.74
SMCO3A2RU48 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.67■□□□□ 0.74
SMCO3A2RU48 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.67■□□□□ 0.74
SMCO3A2RU48 AC108673.1-201ENST00000510422 1159 ntBASIC19.67■□□□□ 0.74
SMCO3A2RU48 AC005559.1-201ENST00000589661 871 ntBASIC19.67■□□□□ 0.74
SMCO3A2RU48 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.67■□□□□ 0.74
SMCO3A2RU48 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMCO3A2RU48 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMCO3A2RU48 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SMCO3A2RU48 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMCO3A2RU48 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMCO3A2RU48 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMCO3A2RU48 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SMCO3A2RU48 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMCO3A2RU48 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMCO3A2RU48 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMCO3A2RU48 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMCO3A2RU48 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SMCO3A2RU48 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMCO3A2RU48 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.65■□□□□ 0.74
SMCO3A2RU48 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SMCO3A2RU48 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMCO3A2RU48 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SMCO3A2RU48 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SMCO3A2RU48 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SMCO3A2RU48 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SMCO3A2RU48 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SMCO3A2RU48 LINC00273-201ENST00000539813 1452 ntBASIC19.64■□□□□ 0.73
SMCO3A2RU48 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SMCO3A2RU48 DUSP8P4-201ENST00000399538 1761 ntBASIC19.64■□□□□ 0.73
SMCO3A2RU48 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.64■□□□□ 0.73
SMCO3A2RU48 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SMCO3A2RU48 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMCO3A2RU48 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SMCO3A2RU48 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMCO3A2RU48 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.63■□□□□ 0.73
SMCO3A2RU48 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMCO3A2RU48 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMCO3A2RU48 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.63■□□□□ 0.73
SMCO3A2RU48 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMCO3A2RU48 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SMCO3A2RU48 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SMCO3A2RU48 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMCO3A2RU48 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
SMCO3A2RU48 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMCO3A2RU48 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMCO3A2RU48 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SMCO3A2RU48 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMCO3A2RU48 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SMCO3A2RU48 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
SMCO3A2RU48 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMCO3A2RU48 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMCO3A2RU48 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms