Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CENPVL3A0A0U1RRI6 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CENPVL3A0A0U1RRI6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CENPVL3A0A0U1RRI6 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
CENPVL3A0A0U1RRI6 AC129492.7-201ENST00000622992 756 ntBASIC20.02■□□□□ 0.8
CENPVL3A0A0U1RRI6 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.01■□□□□ 0.79
CENPVL3A0A0U1RRI6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
CENPVL3A0A0U1RRI6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CENPVL3A0A0U1RRI6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
CENPVL3A0A0U1RRI6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CENPVL3A0A0U1RRI6 RAP2CP1-202ENST00000605179 643 ntBASIC20.01■□□□□ 0.79
CENPVL3A0A0U1RRI6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CENPVL3A0A0U1RRI6 AL449106.1-201ENST00000608517 1980 ntBASIC20.01■□□□□ 0.79
CENPVL3A0A0U1RRI6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CENPVL3A0A0U1RRI6 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20■□□□□ 0.79
CENPVL3A0A0U1RRI6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20■□□□□ 0.79
CENPVL3A0A0U1RRI6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
CENPVL3A0A0U1RRI6 AC142086.6-201ENST00000621154 1765 ntBASIC20■□□□□ 0.79
CENPVL3A0A0U1RRI6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CENPVL3A0A0U1RRI6 BX255925.1-201ENST00000566954 1854 ntBASIC19.99■□□□□ 0.79
CENPVL3A0A0U1RRI6 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CENPVL3A0A0U1RRI6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
CENPVL3A0A0U1RRI6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CENPVL3A0A0U1RRI6 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CENPVL3A0A0U1RRI6 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CENPVL3A0A0U1RRI6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CENPVL3A0A0U1RRI6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CENPVL3A0A0U1RRI6 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.99■□□□□ 0.79
CENPVL3A0A0U1RRI6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CENPVL3A0A0U1RRI6 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CENPVL3A0A0U1RRI6 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CENPVL3A0A0U1RRI6 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CENPVL3A0A0U1RRI6 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CENPVL3A0A0U1RRI6 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.98■□□□□ 0.79
CENPVL3A0A0U1RRI6 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.98■□□□□ 0.79
CENPVL3A0A0U1RRI6 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CENPVL3A0A0U1RRI6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CENPVL3A0A0U1RRI6 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CENPVL3A0A0U1RRI6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CENPVL3A0A0U1RRI6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CENPVL3A0A0U1RRI6 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.96■□□□□ 0.79
CENPVL3A0A0U1RRI6 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CENPVL3A0A0U1RRI6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
CENPVL3A0A0U1RRI6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.96■□□□□ 0.79
CENPVL3A0A0U1RRI6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CENPVL3A0A0U1RRI6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.95■□□□□ 0.78
CENPVL3A0A0U1RRI6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.95■□□□□ 0.78
CENPVL3A0A0U1RRI6 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CENPVL3A0A0U1RRI6 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.95■□□□□ 0.78
CENPVL3A0A0U1RRI6 DUX4L18-201ENST00000553347 1267 ntBASIC19.95■□□□□ 0.78
CENPVL3A0A0U1RRI6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CENPVL3A0A0U1RRI6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.94■□□□□ 0.78
CENPVL3A0A0U1RRI6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CENPVL3A0A0U1RRI6 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CENPVL3A0A0U1RRI6 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CENPVL3A0A0U1RRI6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CENPVL3A0A0U1RRI6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.94■□□□□ 0.78
CENPVL3A0A0U1RRI6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CENPVL3A0A0U1RRI6 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CENPVL3A0A0U1RRI6 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CENPVL3A0A0U1RRI6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CENPVL3A0A0U1RRI6 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CENPVL3A0A0U1RRI6 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.93■□□□□ 0.78
CENPVL3A0A0U1RRI6 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.93■□□□□ 0.78
CENPVL3A0A0U1RRI6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CENPVL3A0A0U1RRI6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CENPVL3A0A0U1RRI6 DUX4L9-201ENST00000449051 1259 ntBASIC19.92■□□□□ 0.78
CENPVL3A0A0U1RRI6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CENPVL3A0A0U1RRI6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CENPVL3A0A0U1RRI6 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CENPVL3A0A0U1RRI6 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CENPVL3A0A0U1RRI6 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CENPVL3A0A0U1RRI6 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CENPVL3A0A0U1RRI6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.91■□□□□ 0.78
CENPVL3A0A0U1RRI6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.91■□□□□ 0.78
CENPVL3A0A0U1RRI6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CENPVL3A0A0U1RRI6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CENPVL3A0A0U1RRI6 SPCS2P3-201ENST00000500401 656 ntBASIC19.9■□□□□ 0.78
CENPVL3A0A0U1RRI6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CENPVL3A0A0U1RRI6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CENPVL3A0A0U1RRI6 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CENPVL3A0A0U1RRI6 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CENPVL3A0A0U1RRI6 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.89■□□□□ 0.77
CENPVL3A0A0U1RRI6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CENPVL3A0A0U1RRI6 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CENPVL3A0A0U1RRI6 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.89■□□□□ 0.77
CENPVL3A0A0U1RRI6 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CENPVL3A0A0U1RRI6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CENPVL3A0A0U1RRI6 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CENPVL3A0A0U1RRI6 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.88■□□□□ 0.77
CENPVL3A0A0U1RRI6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
CENPVL3A0A0U1RRI6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CENPVL3A0A0U1RRI6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CENPVL3A0A0U1RRI6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CENPVL3A0A0U1RRI6 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.87■□□□□ 0.77
CENPVL3A0A0U1RRI6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.87■□□□□ 0.77
CENPVL3A0A0U1RRI6 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CENPVL3A0A0U1RRI6 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CENPVL3A0A0U1RRI6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CENPVL3A0A0U1RRI6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms