Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
IGHV4-28A0A0C4DH34 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
IGHV4-28A0A0C4DH34 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
IGHV4-28A0A0C4DH34 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.73■□□□□ 0.43
IGHV4-28A0A0C4DH34 AL359504.2-201ENST00000605506 1601 ntBASIC17.73■□□□□ 0.43
IGHV4-28A0A0C4DH34 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
IGHV4-28A0A0C4DH34 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
IGHV4-28A0A0C4DH34 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IGHV4-28A0A0C4DH34 AL449106.1-201ENST00000608517 1980 ntBASIC17.73■□□□□ 0.43
IGHV4-28A0A0C4DH34 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
IGHV4-28A0A0C4DH34 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
IGHV4-28A0A0C4DH34 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
IGHV4-28A0A0C4DH34 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IGHV4-28A0A0C4DH34 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC17.71■□□□□ 0.43
IGHV4-28A0A0C4DH34 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
IGHV4-28A0A0C4DH34 RP9P-202ENST00000450133 1212 ntBASIC17.71■□□□□ 0.43
IGHV4-28A0A0C4DH34 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.71■□□□□ 0.43
IGHV4-28A0A0C4DH34 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
IGHV4-28A0A0C4DH34 MIR3960-201ENST00000583311 91 ntBASIC17.71■□□□□ 0.43
IGHV4-28A0A0C4DH34 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
IGHV4-28A0A0C4DH34 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IGHV4-28A0A0C4DH34 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
IGHV4-28A0A0C4DH34 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IGHV4-28A0A0C4DH34 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.7■□□□□ 0.42
IGHV4-28A0A0C4DH34 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IGHV4-28A0A0C4DH34 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
IGHV4-28A0A0C4DH34 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.69■□□□□ 0.42
IGHV4-28A0A0C4DH34 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IGHV4-28A0A0C4DH34 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.69■□□□□ 0.42
IGHV4-28A0A0C4DH34 AC093536.1-201ENST00000569153 554 ntBASIC17.69■□□□□ 0.42
IGHV4-28A0A0C4DH34 AC133552.2-201ENST00000619106 1032 ntBASIC17.69■□□□□ 0.42
IGHV4-28A0A0C4DH34 AC012354.3-201ENST00000623734 483 ntBASIC17.69■□□□□ 0.42
IGHV4-28A0A0C4DH34 AC009831.1-201ENST00000580420 1582 ntBASIC17.69■□□□□ 0.42
IGHV4-28A0A0C4DH34 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
IGHV4-28A0A0C4DH34 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IGHV4-28A0A0C4DH34 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
IGHV4-28A0A0C4DH34 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
IGHV4-28A0A0C4DH34 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.68■□□□□ 0.42
IGHV4-28A0A0C4DH34 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
IGHV4-28A0A0C4DH34 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
IGHV4-28A0A0C4DH34 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.68■□□□□ 0.42
IGHV4-28A0A0C4DH34 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IGHV4-28A0A0C4DH34 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC17.68■□□□□ 0.42
IGHV4-28A0A0C4DH34 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
IGHV4-28A0A0C4DH34 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
IGHV4-28A0A0C4DH34 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
IGHV4-28A0A0C4DH34 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.66■□□□□ 0.42
IGHV4-28A0A0C4DH34 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IGHV4-28A0A0C4DH34 KRT18P60-201ENST00000312876 1297 ntBASIC17.66■□□□□ 0.42
IGHV4-28A0A0C4DH34 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
IGHV4-28A0A0C4DH34 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.66■□□□□ 0.42
IGHV4-28A0A0C4DH34 AC026202.3-201ENST00000600805 1127 ntBASIC17.66■□□□□ 0.42
IGHV4-28A0A0C4DH34 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IGHV4-28A0A0C4DH34 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
IGHV4-28A0A0C4DH34 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
IGHV4-28A0A0C4DH34 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IGHV4-28A0A0C4DH34 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC17.65■□□□□ 0.42
IGHV4-28A0A0C4DH34 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC17.65■□□□□ 0.42
IGHV4-28A0A0C4DH34 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
IGHV4-28A0A0C4DH34 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IGHV4-28A0A0C4DH34 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
IGHV4-28A0A0C4DH34 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IGHV4-28A0A0C4DH34 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC17.65■□□□□ 0.42
IGHV4-28A0A0C4DH34 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
IGHV4-28A0A0C4DH34 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IGHV4-28A0A0C4DH34 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
IGHV4-28A0A0C4DH34 AL592293.1-201ENST00000502889 1188 ntBASIC17.64■□□□□ 0.41
IGHV4-28A0A0C4DH34 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
IGHV4-28A0A0C4DH34 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
IGHV4-28A0A0C4DH34 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IGHV4-28A0A0C4DH34 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.63■□□□□ 0.41
IGHV4-28A0A0C4DH34 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IGHV4-28A0A0C4DH34 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IGHV4-28A0A0C4DH34 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
IGHV4-28A0A0C4DH34 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC17.63■□□□□ 0.41
IGHV4-28A0A0C4DH34 SHF-208ENST00000560734 1731 ntTSL 3 BASIC17.63■□□□□ 0.41
IGHV4-28A0A0C4DH34 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
IGHV4-28A0A0C4DH34 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IGHV4-28A0A0C4DH34 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IGHV4-28A0A0C4DH34 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
IGHV4-28A0A0C4DH34 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IGHV4-28A0A0C4DH34 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC17.62■□□□□ 0.41
IGHV4-28A0A0C4DH34 RAP2CP1-202ENST00000605179 643 ntBASIC17.62■□□□□ 0.41
IGHV4-28A0A0C4DH34 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC17.62■□□□□ 0.41
IGHV4-28A0A0C4DH34 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IGHV4-28A0A0C4DH34 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
IGHV4-28A0A0C4DH34 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IGHV4-28A0A0C4DH34 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
IGHV4-28A0A0C4DH34 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.61■□□□□ 0.41
IGHV4-28A0A0C4DH34 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
IGHV4-28A0A0C4DH34 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
IGHV4-28A0A0C4DH34 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IGHV4-28A0A0C4DH34 AL033527.3-201ENST00000566366 1196 ntBASIC17.6■□□□□ 0.41
IGHV4-28A0A0C4DH34 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
IGHV4-28A0A0C4DH34 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
IGHV4-28A0A0C4DH34 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
IGHV4-28A0A0C4DH34 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IGHV4-28A0A0C4DH34 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
IGHV4-28A0A0C4DH34 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC17.59■□□□□ 0.41
IGHV4-28A0A0C4DH34 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms