Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV4A0A0B4J268 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV4A0A0B4J268 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV4A0A0B4J268 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TRAV4A0A0B4J268 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.57■□□□□ 0.4
TRAV4A0A0B4J268 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV4A0A0B4J268 CR559946.2-201ENST00000623684 991 ntBASIC17.57■□□□□ 0.4
TRAV4A0A0B4J268 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV4A0A0B4J268 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV4A0A0B4J268 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC17.57■□□□□ 0.4
TRAV4A0A0B4J268 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV4A0A0B4J268 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
TRAV4A0A0B4J268 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TRAV4A0A0B4J268 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TRAV4A0A0B4J268 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV4A0A0B4J268 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV4A0A0B4J268 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV4A0A0B4J268 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
TRAV4A0A0B4J268 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC17.55■□□□□ 0.4
TRAV4A0A0B4J268 HLA-V-202ENST00000446817 847 ntBASIC17.55■□□□□ 0.4
TRAV4A0A0B4J268 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV4A0A0B4J268 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV4A0A0B4J268 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TRAV4A0A0B4J268 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV4A0A0B4J268 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV4A0A0B4J268 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV4A0A0B4J268 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC17.54■□□□□ 0.4
TRAV4A0A0B4J268 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TRAV4A0A0B4J268 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV4A0A0B4J268 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV4A0A0B4J268 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV4A0A0B4J268 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.53■□□□□ 0.4
TRAV4A0A0B4J268 MIR3648-2-201ENST00000581792 180 ntBASIC17.53■□□□□ 0.4
TRAV4A0A0B4J268 MIR3648-1-201ENST00000615959 180 ntBASIC17.53■□□□□ 0.4
TRAV4A0A0B4J268 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17.53■□□□□ 0.4
TRAV4A0A0B4J268 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRAV4A0A0B4J268 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TRAV4A0A0B4J268 AC091060.1-201ENST00000623524 1766 ntBASIC17.53■□□□□ 0.4
TRAV4A0A0B4J268 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC17.52■□□□□ 0.4
TRAV4A0A0B4J268 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
TRAV4A0A0B4J268 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
TRAV4A0A0B4J268 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17.52■□□□□ 0.4
TRAV4A0A0B4J268 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRAV4A0A0B4J268 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV4A0A0B4J268 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.52■□□□□ 0.39
TRAV4A0A0B4J268 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
TRAV4A0A0B4J268 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.52■□□□□ 0.39
TRAV4A0A0B4J268 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRAV4A0A0B4J268 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAV4A0A0B4J268 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV4A0A0B4J268 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV4A0A0B4J268 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.51■□□□□ 0.39
TRAV4A0A0B4J268 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRAV4A0A0B4J268 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV4A0A0B4J268 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV4A0A0B4J268 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV4A0A0B4J268 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV4A0A0B4J268 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC17.51■□□□□ 0.39
TRAV4A0A0B4J268 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRAV4A0A0B4J268 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV4A0A0B4J268 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.5■□□□□ 0.39
TRAV4A0A0B4J268 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV4A0A0B4J268 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV4A0A0B4J268 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV4A0A0B4J268 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV4A0A0B4J268 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC17.5■□□□□ 0.39
TRAV4A0A0B4J268 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV4A0A0B4J268 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TRAV4A0A0B4J268 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
TRAV4A0A0B4J268 AC145676.1-201ENST00000514988 2004 ntBASIC17.49■□□□□ 0.39
TRAV4A0A0B4J268 AC126177.7-201ENST00000547904 679 ntBASIC17.49■□□□□ 0.39
TRAV4A0A0B4J268 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC17.49■□□□□ 0.39
TRAV4A0A0B4J268 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
TRAV4A0A0B4J268 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV4A0A0B4J268 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV4A0A0B4J268 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV4A0A0B4J268 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV4A0A0B4J268 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV4A0A0B4J268 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
TRAV4A0A0B4J268 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV4A0A0B4J268 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
TRAV4A0A0B4J268 AL359258.2-201ENST00000564063 1566 ntBASIC17.48■□□□□ 0.39
TRAV4A0A0B4J268 AC092803.2-201ENST00000564287 1899 ntBASIC17.48■□□□□ 0.39
TRAV4A0A0B4J268 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV4A0A0B4J268 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAV4A0A0B4J268 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV4A0A0B4J268 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV4A0A0B4J268 AC016575.1-201ENST00000607026 382 ntBASIC17.47■□□□□ 0.39
TRAV4A0A0B4J268 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.47■□□□□ 0.39
TRAV4A0A0B4J268 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
TRAV4A0A0B4J268 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV4A0A0B4J268 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV4A0A0B4J268 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV4A0A0B4J268 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV4A0A0B4J268 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV4A0A0B4J268 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV4A0A0B4J268 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV4A0A0B4J268 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV4A0A0B4J268 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TRAV4A0A0B4J268 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms