Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 MTDHP3-201ENST00000594186 672 ntBASIC16.75■□□□□ 0.27
CTSFQ9UBX1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.75■□□□□ 0.27
CTSFQ9UBX1 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSFQ9UBX1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSFQ9UBX1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTSFQ9UBX1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CTSFQ9UBX1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSFQ9UBX1 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSFQ9UBX1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSFQ9UBX1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
CTSFQ9UBX1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
CTSFQ9UBX1 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSFQ9UBX1 AC005332.8-201ENST00000622750 2735 ntBASIC16.75■□□□□ 0.27
CTSFQ9UBX1 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.75■□□□□ 0.27
CTSFQ9UBX1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.75■□□□□ 0.27
CTSFQ9UBX1 HCG11-201ENST00000411553 5696 ntBASIC16.74■□□□□ 0.27
CTSFQ9UBX1 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 AC097374.2-201ENST00000618617 1306 ntBASIC16.74■□□□□ 0.27
CTSFQ9UBX1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 AP000997.3-201ENST00000623333 2250 ntBASIC16.74■□□□□ 0.27
CTSFQ9UBX1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 FAM197Y8-203ENST00000450145 560 ntBASIC16.74■□□□□ 0.27
CTSFQ9UBX1 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 FGFR3P6-201ENST00000457012 610 ntBASIC16.74■□□□□ 0.27
CTSFQ9UBX1 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.74■□□□□ 0.27
CTSFQ9UBX1 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CTSFQ9UBX1 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 FZD10-202ENST00000539839 3282 ntBASIC16.73■□□□□ 0.27
CTSFQ9UBX1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 ABCD1P5-201ENST00000445663 754 ntBASIC16.73■□□□□ 0.27
CTSFQ9UBX1 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 AC079776.4-201ENST00000511039 504 ntBASIC16.73■□□□□ 0.27
CTSFQ9UBX1 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 AL662844.1-201ENST00000546340 181 ntBASIC16.73■□□□□ 0.27
CTSFQ9UBX1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CTSFQ9UBX1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms