Protein–RNA interactions for Protein: Q9NZ63

C9orf78, Telomere length and silencing protein 1 homolog, humanhuman

Predicted RBP Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78Q9NZ63 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
C9orf78Q9NZ63 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
C9orf78Q9NZ63 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC22.33■■□□□ 1.16
C9orf78Q9NZ63 NEFHP1-201ENST00000412845 2629 ntBASIC22.33■■□□□ 1.16
C9orf78Q9NZ63 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.16
C9orf78Q9NZ63 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
C9orf78Q9NZ63 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
C9orf78Q9NZ63 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC22.33■■□□□ 1.16
C9orf78Q9NZ63 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
C9orf78Q9NZ63 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
C9orf78Q9NZ63 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
C9orf78Q9NZ63 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC22.32■■□□□ 1.16
C9orf78Q9NZ63 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC22.32■■□□□ 1.16
C9orf78Q9NZ63 KRT18P55-202ENST00000578578 1546 ntBASIC22.32■■□□□ 1.16
C9orf78Q9NZ63 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
C9orf78Q9NZ63 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC22.32■■□□□ 1.16
C9orf78Q9NZ63 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
C9orf78Q9NZ63 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
C9orf78Q9NZ63 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
C9orf78Q9NZ63 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
C9orf78Q9NZ63 CD9-202ENST00000382515 1229 ntTSL 5 BASIC22.32■■□□□ 1.16
C9orf78Q9NZ63 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC22.32■■□□□ 1.16
C9orf78Q9NZ63 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC22.32■■□□□ 1.16
C9orf78Q9NZ63 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC22.32■■□□□ 1.16
C9orf78Q9NZ63 MNT-208ENST00000575394 606 ntTSL 4 BASIC22.32■■□□□ 1.16
C9orf78Q9NZ63 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC22.32■■□□□ 1.16
C9orf78Q9NZ63 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC22.32■■□□□ 1.16
C9orf78Q9NZ63 AC104692.2-201ENST00000603054 253 ntBASIC22.32■■□□□ 1.16
C9orf78Q9NZ63 AP001269.4-201ENST00000609611 512 ntBASIC22.32■■□□□ 1.16
C9orf78Q9NZ63 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC22.32■■□□□ 1.16
C9orf78Q9NZ63 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
C9orf78Q9NZ63 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC22.32■■□□□ 1.16
C9orf78Q9NZ63 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
C9orf78Q9NZ63 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC22.32■■□□□ 1.16
C9orf78Q9NZ63 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
C9orf78Q9NZ63 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
C9orf78Q9NZ63 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
C9orf78Q9NZ63 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
C9orf78Q9NZ63 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
C9orf78Q9NZ63 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
C9orf78Q9NZ63 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 COX5BP2-201ENST00000392354 334 ntBASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 CTNS-203ENST00000399306 803 ntTSL 3 BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 ABCD1P5-201ENST00000445663 754 ntBASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 PON3-205ENST00000451904 1053 ntTSL 3 BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
C9orf78Q9NZ63 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
C9orf78Q9NZ63 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
C9orf78Q9NZ63 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
C9orf78Q9NZ63 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
C9orf78Q9NZ63 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC22.3■■□□□ 1.16
C9orf78Q9NZ63 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC22.3■■□□□ 1.16
C9orf78Q9NZ63 RBSN-204ENST00000449050 903 ntTSL 2 BASIC22.3■■□□□ 1.16
C9orf78Q9NZ63 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC22.3■■□□□ 1.16
C9orf78Q9NZ63 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC22.3■■□□□ 1.16
C9orf78Q9NZ63 AC122714.2-201ENST00000502787 707 ntBASIC22.3■■□□□ 1.16
C9orf78Q9NZ63 AL160237.2-201ENST00000556165 472 ntBASIC22.3■■□□□ 1.16
C9orf78Q9NZ63 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC22.3■■□□□ 1.16
C9orf78Q9NZ63 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
C9orf78Q9NZ63 KLK8-205ENST00000593490 267 ntTSL 3 BASIC22.3■■□□□ 1.16
C9orf78Q9NZ63 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
C9orf78Q9NZ63 AC008608.2-201ENST00000606089 416 ntBASIC22.3■■□□□ 1.16
C9orf78Q9NZ63 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
C9orf78Q9NZ63 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
C9orf78Q9NZ63 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
C9orf78Q9NZ63 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
C9orf78Q9NZ63 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms