Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 HLA-F-220ENST00000434407 884 ntBASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 AC104819.1-201ENST00000504587 486 ntBASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 RNF126P1-202ENST00000569893 925 ntBASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 AL671883.3-201ENST00000603274 991 ntBASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 OR6D1P-202ENST00000641007 5290 ntBASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.65■□□□□ 0.74
RPGRIP1Q96KN7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
RPGRIP1Q96KN7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RPGRIP1Q96KN7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
RPGRIP1Q96KN7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RPGRIP1Q96KN7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RPGRIP1Q96KN7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 MIR662-201ENST00000384847 95 ntBASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 AL590627.1-203ENST00000421194 1026 ntBASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RPGRIP1Q96KN7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 AL391807.1-203ENST00000604392 2365 ntBASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 HLA-A-201ENST00000376802 1334 ntBASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 KRT18P13-201ENST00000400056 1290 ntBASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 KRT16P4-201ENST00000453883 522 ntBASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms