Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RAPGEF4Q8WZA2 AC018445.3-201ENST00000624177 1945 ntBASIC23.23■■□□□ 1.31
RAPGEF4Q8WZA2 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RAPGEF4Q8WZA2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RAPGEF4Q8WZA2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
RAPGEF4Q8WZA2 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
RAPGEF4Q8WZA2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RAPGEF4Q8WZA2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RAPGEF4Q8WZA2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RAPGEF4Q8WZA2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RAPGEF4Q8WZA2 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RAPGEF4Q8WZA2 ALG1L5P-201ENST00000482043 771 ntBASIC23.23■■□□□ 1.31
RAPGEF4Q8WZA2 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RAPGEF4Q8WZA2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC23.23■■□□□ 1.31
RAPGEF4Q8WZA2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC23.23■■□□□ 1.31
RAPGEF4Q8WZA2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC23.23■■□□□ 1.31
RAPGEF4Q8WZA2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RAPGEF4Q8WZA2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
RAPGEF4Q8WZA2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RAPGEF4Q8WZA2 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RAPGEF4Q8WZA2 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC23.23■■□□□ 1.31
RAPGEF4Q8WZA2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RAPGEF4Q8WZA2 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
RAPGEF4Q8WZA2 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC23.23■■□□□ 1.31
RAPGEF4Q8WZA2 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
RAPGEF4Q8WZA2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RAPGEF4Q8WZA2 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC23.22■■□□□ 1.31
RAPGEF4Q8WZA2 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.22■■□□□ 1.31
RAPGEF4Q8WZA2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC23.22■■□□□ 1.31
RAPGEF4Q8WZA2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC23.22■■□□□ 1.31
RAPGEF4Q8WZA2 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RAPGEF4Q8WZA2 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RAPGEF4Q8WZA2 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RAPGEF4Q8WZA2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
RAPGEF4Q8WZA2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC23.22■■□□□ 1.31
RAPGEF4Q8WZA2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
RAPGEF4Q8WZA2 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RAPGEF4Q8WZA2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RAPGEF4Q8WZA2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
RAPGEF4Q8WZA2 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC23.22■■□□□ 1.31
RAPGEF4Q8WZA2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC23.22■■□□□ 1.31
RAPGEF4Q8WZA2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
RAPGEF4Q8WZA2 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC23.22■■□□□ 1.31
RAPGEF4Q8WZA2 MIR4469-201ENST00000583919 79 ntBASIC23.22■■□□□ 1.31
RAPGEF4Q8WZA2 AC004790.2-201ENST00000623588 572 ntBASIC23.22■■□□□ 1.31
RAPGEF4Q8WZA2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RAPGEF4Q8WZA2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RAPGEF4Q8WZA2 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RAPGEF4Q8WZA2 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC23.22■■□□□ 1.31
RAPGEF4Q8WZA2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RAPGEF4Q8WZA2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
RAPGEF4Q8WZA2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC23.21■■□□□ 1.31
RAPGEF4Q8WZA2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RAPGEF4Q8WZA2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC23.21■■□□□ 1.31
RAPGEF4Q8WZA2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
RAPGEF4Q8WZA2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
RAPGEF4Q8WZA2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RAPGEF4Q8WZA2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RAPGEF4Q8WZA2 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC23.21■■□□□ 1.31
RAPGEF4Q8WZA2 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC23.21■■□□□ 1.31
RAPGEF4Q8WZA2 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RAPGEF4Q8WZA2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC23.21■■□□□ 1.31
RAPGEF4Q8WZA2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC23.21■■□□□ 1.31
RAPGEF4Q8WZA2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC23.21■■□□□ 1.31
RAPGEF4Q8WZA2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC23.21■■□□□ 1.31
RAPGEF4Q8WZA2 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC23.21■■□□□ 1.31
RAPGEF4Q8WZA2 RPS15-207ENST00000591032 550 ntTSL 3 BASIC23.21■■□□□ 1.31
RAPGEF4Q8WZA2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC23.21■■□□□ 1.31
RAPGEF4Q8WZA2 AC116407.2-201ENST00000613639 860 ntBASIC23.21■■□□□ 1.31
RAPGEF4Q8WZA2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RAPGEF4Q8WZA2 KRT18P28-201ENST00000453838 1332 ntBASIC23.21■■□□□ 1.31
RAPGEF4Q8WZA2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RAPGEF4Q8WZA2 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RAPGEF4Q8WZA2 PC-208ENST00000529047 1607 ntTSL 3 BASIC23.21■■□□□ 1.31
RAPGEF4Q8WZA2 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RAPGEF4Q8WZA2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RAPGEF4Q8WZA2 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
RAPGEF4Q8WZA2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
RAPGEF4Q8WZA2 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC23.2■■□□□ 1.3
RAPGEF4Q8WZA2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RAPGEF4Q8WZA2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC23.2■■□□□ 1.3
RAPGEF4Q8WZA2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RAPGEF4Q8WZA2 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC23.2■■□□□ 1.3
RAPGEF4Q8WZA2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC23.2■■□□□ 1.3
RAPGEF4Q8WZA2 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RAPGEF4Q8WZA2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC23.2■■□□□ 1.3
RAPGEF4Q8WZA2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RAPGEF4Q8WZA2 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC23.2■■□□□ 1.3
RAPGEF4Q8WZA2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RAPGEF4Q8WZA2 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RAPGEF4Q8WZA2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
RAPGEF4Q8WZA2 SNHG9-202ENST00000564014 471 ntBASIC23.2■■□□□ 1.3
RAPGEF4Q8WZA2 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC23.2■■□□□ 1.3
RAPGEF4Q8WZA2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms