Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP3S2P59780 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
AP3S2P59780 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP3S2P59780 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.33■□□□□ 0.04
AP3S2P59780 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP3S2P59780 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
AP3S2P59780 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.33■□□□□ 0.04
AP3S2P59780 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP3S2P59780 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP3S2P59780 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.33■□□□□ 0.04
AP3S2P59780 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP3S2P59780 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
AP3S2P59780 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP3S2P59780 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP3S2P59780 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
AP3S2P59780 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP3S2P59780 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.33■□□□□ 0.04
AP3S2P59780 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
AP3S2P59780 AL163051.1-201ENST00000569214 1512 ntBASIC15.33■□□□□ 0.04
AP3S2P59780 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S2P59780 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
AP3S2P59780 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S2P59780 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.32■□□□□ 0.04
AP3S2P59780 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.32■□□□□ 0.04
AP3S2P59780 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S2P59780 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S2P59780 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.32■□□□□ 0.04
AP3S2P59780 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
AP3S2P59780 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.32■□□□□ 0.04
AP3S2P59780 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S2P59780 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.32■□□□□ 0.04
AP3S2P59780 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.32■□□□□ 0.04
AP3S2P59780 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S2P59780 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S2P59780 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
AP3S2P59780 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S2P59780 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC15.32■□□□□ 0.04
AP3S2P59780 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S2P59780 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
AP3S2P59780 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC15.32■□□□□ 0.04
AP3S2P59780 DUTP2-201ENST00000519164 463 ntBASIC15.32■□□□□ 0.04
AP3S2P59780 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S2P59780 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.32■□□□□ 0.04
AP3S2P59780 AC060766.5-201ENST00000590539 871 ntBASIC15.32■□□□□ 0.04
AP3S2P59780 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC15.32■□□□□ 0.04
AP3S2P59780 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S2P59780 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.32■□□□□ 0.04
AP3S2P59780 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S2P59780 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S2P59780 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.32■□□□□ 0.04
AP3S2P59780 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
AP3S2P59780 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S2P59780 AL603756.1-201ENST00000606511 2163 ntBASIC15.32■□□□□ 0.04
AP3S2P59780 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S2P59780 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S2P59780 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S2P59780 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.32■□□□□ 0.04
AP3S2P59780 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S2P59780 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S2P59780 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
AP3S2P59780 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.32■□□□□ 0.04
AP3S2P59780 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
AP3S2P59780 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S2P59780 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S2P59780 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S2P59780 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S2P59780 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
AP3S2P59780 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S2P59780 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.31■□□□□ 0.04
AP3S2P59780 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.31■□□□□ 0.04
AP3S2P59780 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S2P59780 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.31■□□□□ 0.04
AP3S2P59780 ELP6-205ENST00000439305 880 ntTSL 2 BASIC15.31■□□□□ 0.04
AP3S2P59780 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.31■□□□□ 0.04
AP3S2P59780 AC091874.3-201ENST00000512672 1195 ntBASIC15.31■□□□□ 0.04
AP3S2P59780 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.31■□□□□ 0.04
AP3S2P59780 AC131212.4-201ENST00000623606 975 ntBASIC15.31■□□□□ 0.04
AP3S2P59780 LINC01451-201ENST00000623792 534 ntBASIC15.31■□□□□ 0.04
AP3S2P59780 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S2P59780 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S2P59780 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S2P59780 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.31■□□□□ 0.04
AP3S2P59780 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
AP3S2P59780 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S2P59780 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.31■□□□□ 0.04
AP3S2P59780 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S2P59780 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S2P59780 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S2P59780 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.31■□□□□ 0.04
AP3S2P59780 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S2P59780 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S2P59780 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.31■□□□□ 0.04
AP3S2P59780 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
AP3S2P59780 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S2P59780 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
AP3S2P59780 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S2P59780 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
AP3S2P59780 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3S2P59780 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
AP3S2P59780 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms