Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
WNT3AP56704 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
WNT3AP56704 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.02■□□□□ 0.47
WNT3AP56704 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
WNT3AP56704 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.02■□□□□ 0.47
WNT3AP56704 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
WNT3AP56704 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.02■□□□□ 0.47
WNT3AP56704 IER3-202ENST00000376377 1350 ntBASIC18.02■□□□□ 0.47
WNT3AP56704 AC016734.2-201ENST00000624325 1377 ntBASIC18.02■□□□□ 0.47
WNT3AP56704 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
WNT3AP56704 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
WNT3AP56704 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
WNT3AP56704 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.02■□□□□ 0.47
WNT3AP56704 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
WNT3AP56704 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
WNT3AP56704 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
WNT3AP56704 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
WNT3AP56704 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
WNT3AP56704 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
WNT3AP56704 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.01■□□□□ 0.47
WNT3AP56704 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
WNT3AP56704 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.01■□□□□ 0.47
WNT3AP56704 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.01■□□□□ 0.47
WNT3AP56704 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
WNT3AP56704 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
WNT3AP56704 ARMC10P1-201ENST00000313754 855 ntBASIC18.01■□□□□ 0.47
WNT3AP56704 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.01■□□□□ 0.47
WNT3AP56704 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
WNT3AP56704 AL845331.1-201ENST00000424978 1190 ntBASIC18.01■□□□□ 0.47
WNT3AP56704 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.01■□□□□ 0.47
WNT3AP56704 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.01■□□□□ 0.47
WNT3AP56704 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.01■□□□□ 0.47
WNT3AP56704 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
WNT3AP56704 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
WNT3AP56704 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
WNT3AP56704 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
WNT3AP56704 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
WNT3AP56704 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
WNT3AP56704 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.01■□□□□ 0.47
WNT3AP56704 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
WNT3AP56704 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
WNT3AP56704 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
WNT3AP56704 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18■□□□□ 0.47
WNT3AP56704 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18■□□□□ 0.47
WNT3AP56704 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
WNT3AP56704 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18■□□□□ 0.47
WNT3AP56704 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
WNT3AP56704 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
WNT3AP56704 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
WNT3AP56704 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18■□□□□ 0.47
WNT3AP56704 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
WNT3AP56704 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
WNT3AP56704 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
WNT3AP56704 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
WNT3AP56704 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
WNT3AP56704 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
WNT3AP56704 CHCHD2P8-201ENST00000429873 447 ntBASIC18■□□□□ 0.47
WNT3AP56704 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18■□□□□ 0.47
WNT3AP56704 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18■□□□□ 0.47
WNT3AP56704 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
WNT3AP56704 AL358472.4-201ENST00000633140 710 ntBASIC18■□□□□ 0.47
WNT3AP56704 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
WNT3AP56704 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18■□□□□ 0.47
WNT3AP56704 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
WNT3AP56704 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18■□□□□ 0.47
WNT3AP56704 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
WNT3AP56704 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18■□□□□ 0.47
WNT3AP56704 FST-202ENST00000396947 2538 ntTSL 5 BASIC18■□□□□ 0.47
WNT3AP56704 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
WNT3AP56704 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
WNT3AP56704 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
WNT3AP56704 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.99■□□□□ 0.47
WNT3AP56704 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
WNT3AP56704 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
WNT3AP56704 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
WNT3AP56704 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
WNT3AP56704 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
WNT3AP56704 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
WNT3AP56704 LETM1P2-201ENST00000597330 2178 ntBASIC17.99■□□□□ 0.47
WNT3AP56704 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
WNT3AP56704 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
WNT3AP56704 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.99■□□□□ 0.47
WNT3AP56704 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.99■□□□□ 0.47
WNT3AP56704 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.99■□□□□ 0.47
WNT3AP56704 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.99■□□□□ 0.47
WNT3AP56704 AL353801.3-201ENST00000609898 542 ntBASIC17.99■□□□□ 0.47
WNT3AP56704 AP000550.4-202ENST00000639755 178 ntBASIC17.99■□□□□ 0.47
WNT3AP56704 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
WNT3AP56704 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
WNT3AP56704 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.99■□□□□ 0.47
WNT3AP56704 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.99■□□□□ 0.47
WNT3AP56704 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
WNT3AP56704 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.99■□□□□ 0.47
WNT3AP56704 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
WNT3AP56704 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.99■□□□□ 0.47
WNT3AP56704 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
WNT3AP56704 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.99■□□□□ 0.47
WNT3AP56704 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
WNT3AP56704 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
WNT3AP56704 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms