Protein–RNA interactions for Protein: A0A0C4DH28

TRGV4, T-cell receptor gamma variable 4 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV4A0A0C4DH28 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 GATB-213ENST00000515812 1893 ntTSL 5 BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 RNF152P1-201ENST00000397754 604 ntBASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 HOMER2P1-201ENST00000455653 964 ntBASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 SP100-208ENST00000427101 1922 ntTSL 2 BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRGV4A0A0C4DH28 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 STARP1-201ENST00000397973 869 ntBASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 TSPY5P-201ENST00000426936 936 ntBASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 AC117947.1-201ENST00000427448 529 ntBASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 KRT18P48-201ENST00000434763 852 ntBASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 SLC25A6P5-201ENST00000435663 894 ntBASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 PPOX-219ENST00000544598 813 ntTSL 2 BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 LINC01238-205ENST00000567549 1107 ntBASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRGV4A0A0C4DH28 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms