Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
CDK11AQ9UQ88 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CDK11AQ9UQ88 AC018445.3-201ENST00000624177 1945 ntBASIC27.42■■□□□ 1.98
CDK11AQ9UQ88 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CDK11AQ9UQ88 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CDK11AQ9UQ88 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CDK11AQ9UQ88 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC27.42■■□□□ 1.98
CDK11AQ9UQ88 AC254562.1-201ENST00000417586 456 ntBASIC27.42■■□□□ 1.98
CDK11AQ9UQ88 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC27.42■■□□□ 1.98
CDK11AQ9UQ88 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC27.42■■□□□ 1.98
CDK11AQ9UQ88 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC27.42■■□□□ 1.98
CDK11AQ9UQ88 MIR4469-201ENST00000583919 79 ntBASIC27.42■■□□□ 1.98
CDK11AQ9UQ88 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC27.42■■□□□ 1.98
CDK11AQ9UQ88 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC27.42■■□□□ 1.98
CDK11AQ9UQ88 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
CDK11AQ9UQ88 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC27.42■■□□□ 1.98
CDK11AQ9UQ88 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC27.42■■□□□ 1.98
CDK11AQ9UQ88 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC27.42■■□□□ 1.98
CDK11AQ9UQ88 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CDK11AQ9UQ88 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
CDK11AQ9UQ88 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CDK11AQ9UQ88 KRT18P28-201ENST00000453838 1332 ntBASIC27.41■■□□□ 1.98
CDK11AQ9UQ88 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CDK11AQ9UQ88 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CDK11AQ9UQ88 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC27.41■■□□□ 1.98
CDK11AQ9UQ88 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CDK11AQ9UQ88 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC27.41■■□□□ 1.98
CDK11AQ9UQ88 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
CDK11AQ9UQ88 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC27.41■■□□□ 1.98
CDK11AQ9UQ88 MKNK2P1-201ENST00000437526 628 ntBASIC27.41■■□□□ 1.98
CDK11AQ9UQ88 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
CDK11AQ9UQ88 ALG1L5P-201ENST00000482043 771 ntBASIC27.41■■□□□ 1.98
CDK11AQ9UQ88 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC27.41■■□□□ 1.98
CDK11AQ9UQ88 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC27.41■■□□□ 1.98
CDK11AQ9UQ88 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC27.41■■□□□ 1.98
CDK11AQ9UQ88 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC27.41■■□□□ 1.98
CDK11AQ9UQ88 AL805961.1-202ENST00000641562 540 ntBASIC27.41■■□□□ 1.98
CDK11AQ9UQ88 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CDK11AQ9UQ88 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC27.41■■□□□ 1.98
CDK11AQ9UQ88 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC27.41■■□□□ 1.98
CDK11AQ9UQ88 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
CDK11AQ9UQ88 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC27.41■■□□□ 1.98
CDK11AQ9UQ88 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC27.41■■□□□ 1.98
CDK11AQ9UQ88 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CDK11AQ9UQ88 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC27.4■■□□□ 1.98
CDK11AQ9UQ88 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CDK11AQ9UQ88 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CDK11AQ9UQ88 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CDK11AQ9UQ88 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC27.4■■□□□ 1.98
CDK11AQ9UQ88 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CDK11AQ9UQ88 AL596442.2-201ENST00000610240 980 ntBASIC27.4■■□□□ 1.98
CDK11AQ9UQ88 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CDK11AQ9UQ88 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC27.4■■□□□ 1.98
CDK11AQ9UQ88 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
CDK11AQ9UQ88 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC27.39■■□□□ 1.98
CDK11AQ9UQ88 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CDK11AQ9UQ88 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC27.39■■□□□ 1.98
CDK11AQ9UQ88 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CDK11AQ9UQ88 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
CDK11AQ9UQ88 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CDK11AQ9UQ88 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC27.39■■□□□ 1.98
CDK11AQ9UQ88 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
CDK11AQ9UQ88 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC27.39■■□□□ 1.98
CDK11AQ9UQ88 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
CDK11AQ9UQ88 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC27.39■■□□□ 1.98
CDK11AQ9UQ88 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC27.39■■□□□ 1.98
CDK11AQ9UQ88 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC27.39■■□□□ 1.98
CDK11AQ9UQ88 CFL1-202ENST00000524553 860 ntTSL 2 BASIC27.39■■□□□ 1.98
CDK11AQ9UQ88 CIPC-205ENST00000555437 566 ntTSL 3 BASIC27.39■■□□□ 1.98
CDK11AQ9UQ88 SNHG9-202ENST00000564014 471 ntBASIC27.39■■□□□ 1.98
CDK11AQ9UQ88 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC27.39■■□□□ 1.98
CDK11AQ9UQ88 AC004790.2-201ENST00000623588 572 ntBASIC27.39■■□□□ 1.98
CDK11AQ9UQ88 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC27.39■■□□□ 1.98
CDK11AQ9UQ88 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
CDK11AQ9UQ88 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
CDK11AQ9UQ88 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
CDK11AQ9UQ88 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC27.39■■□□□ 1.97
CDK11AQ9UQ88 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC27.38■■□□□ 1.97
CDK11AQ9UQ88 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
CDK11AQ9UQ88 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CDK11AQ9UQ88 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CDK11AQ9UQ88 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CDK11AQ9UQ88 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CDK11AQ9UQ88 ATP6V0CP3-201ENST00000417255 467 ntBASIC27.38■■□□□ 1.97
CDK11AQ9UQ88 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC27.38■■□□□ 1.97
CDK11AQ9UQ88 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC27.38■■□□□ 1.97
CDK11AQ9UQ88 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC27.38■■□□□ 1.97
CDK11AQ9UQ88 TMED1-207ENST00000591695 809 ntTSL 5 BASIC27.38■■□□□ 1.97
CDK11AQ9UQ88 AC116407.2-201ENST00000613639 860 ntBASIC27.38■■□□□ 1.97
CDK11AQ9UQ88 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC27.38■■□□□ 1.97
CDK11AQ9UQ88 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CDK11AQ9UQ88 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CDK11AQ9UQ88 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC27.38■■□□□ 1.97
CDK11AQ9UQ88 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
CDK11AQ9UQ88 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
CDK11AQ9UQ88 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC27.38■■□□□ 1.97
CDK11AQ9UQ88 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
CDK11AQ9UQ88 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC27.38■■□□□ 1.97
CDK11AQ9UQ88 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
CDK11AQ9UQ88 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC27.37■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms