Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 PCDHB19P-201ENST00000570871 2371 ntBASIC17.38■□□□□ 0.37
HIPK4Q8NE63 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.38■□□□□ 0.37
HIPK4Q8NE63 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HIPK4Q8NE63 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 NFIC-211ENST00000641145 8399 ntBASIC17.37■□□□□ 0.37
HIPK4Q8NE63 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 CR392000.1-201ENST00000624770 1228 ntBASIC17.37■□□□□ 0.37
HIPK4Q8NE63 AC011270.2-201ENST00000624293 2550 ntBASIC17.37■□□□□ 0.37
HIPK4Q8NE63 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 CROCCP2-202ENST00000412962 2773 ntBASIC17.37■□□□□ 0.37
HIPK4Q8NE63 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
HIPK4Q8NE63 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 AL121761.2-201ENST00000598007 1648 ntBASIC17.36■□□□□ 0.37
HIPK4Q8NE63 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 AC079328.2-201ENST00000561241 3354 ntBASIC17.36■□□□□ 0.37
HIPK4Q8NE63 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 FAM207BP-201ENST00000447172 505 ntBASIC17.36■□□□□ 0.37
HIPK4Q8NE63 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
HIPK4Q8NE63 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.35■□□□□ 0.37
HIPK4Q8NE63 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HIPK4Q8NE63 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
HIPK4Q8NE63 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIPK4Q8NE63 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.35■□□□□ 0.37
HIPK4Q8NE63 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIPK4Q8NE63 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HIPK4Q8NE63 AC008040.2-201ENST00000461049 708 ntBASIC17.35■□□□□ 0.37
HIPK4Q8NE63 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
HIPK4Q8NE63 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.35■□□□□ 0.37
HIPK4Q8NE63 AC130371.2-201ENST00000619443 611 ntBASIC17.35■□□□□ 0.37
HIPK4Q8NE63 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HIPK4Q8NE63 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms