Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.74■□□□□ 0.91
SHROOM1Q2M3G4 SIGLEC16-201ENST00000599858 1437 ntBASIC20.74■□□□□ 0.91
SHROOM1Q2M3G4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.74■□□□□ 0.91
SHROOM1Q2M3G4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.74■□□□□ 0.91
SHROOM1Q2M3G4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SHROOM1Q2M3G4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHROOM1Q2M3G4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.74■□□□□ 0.91
SHROOM1Q2M3G4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.74■□□□□ 0.91
SHROOM1Q2M3G4 AL353593.2-201ENST00000602529 1483 ntBASIC20.74■□□□□ 0.91
SHROOM1Q2M3G4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHROOM1Q2M3G4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHROOM1Q2M3G4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SHROOM1Q2M3G4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
SHROOM1Q2M3G4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 ELK2BP-201ENST00000415014 1224 ntBASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 KRT18P3-201ENST00000451602 1288 ntBASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 AC010327.4-202ENST00000591484 748 ntBASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 FAM197Y3-203ENST00000618346 717 ntBASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 AL020996.1-203ENST00000536896 2307 ntBASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
SHROOM1Q2M3G4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHROOM1Q2M3G4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SHROOM1Q2M3G4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHROOM1Q2M3G4 AC006504.4-201ENST00000592118 1568 ntBASIC20.72■□□□□ 0.91
SHROOM1Q2M3G4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.72■□□□□ 0.91
SHROOM1Q2M3G4 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHROOM1Q2M3G4 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.72■□□□□ 0.91
SHROOM1Q2M3G4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SHROOM1Q2M3G4 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHROOM1Q2M3G4 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHROOM1Q2M3G4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.72■□□□□ 0.91
SHROOM1Q2M3G4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.72■□□□□ 0.91
SHROOM1Q2M3G4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.72■□□□□ 0.91
SHROOM1Q2M3G4 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.72■□□□□ 0.91
SHROOM1Q2M3G4 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.72■□□□□ 0.91
SHROOM1Q2M3G4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHROOM1Q2M3G4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SHROOM1Q2M3G4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.72■□□□□ 0.91
SHROOM1Q2M3G4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHROOM1Q2M3G4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.72■□□□□ 0.91
SHROOM1Q2M3G4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHROOM1Q2M3G4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHROOM1Q2M3G4 BX323043.1-201ENST00000641006 1765 ntBASIC20.72■□□□□ 0.91
SHROOM1Q2M3G4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.72■□□□□ 0.91
SHROOM1Q2M3G4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.72■□□□□ 0.91
SHROOM1Q2M3G4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.72■□□□□ 0.91
SHROOM1Q2M3G4 AL138781.2-201ENST00000617896 1843 ntBASIC20.71■□□□□ 0.91
SHROOM1Q2M3G4 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHROOM1Q2M3G4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SHROOM1Q2M3G4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHROOM1Q2M3G4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.71■□□□□ 0.91
SHROOM1Q2M3G4 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHROOM1Q2M3G4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.71■□□□□ 0.91
SHROOM1Q2M3G4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHROOM1Q2M3G4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SHROOM1Q2M3G4 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SHROOM1Q2M3G4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.71■□□□□ 0.91
SHROOM1Q2M3G4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.71■□□□□ 0.91
SHROOM1Q2M3G4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC20.71■□□□□ 0.91
SHROOM1Q2M3G4 KRT18P2-201ENST00000447938 1258 ntBASIC20.71■□□□□ 0.91
SHROOM1Q2M3G4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.71■□□□□ 0.91
SHROOM1Q2M3G4 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
SHROOM1Q2M3G4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SHROOM1Q2M3G4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.71■□□□□ 0.91
SHROOM1Q2M3G4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.71■□□□□ 0.91
SHROOM1Q2M3G4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SHROOM1Q2M3G4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC20.71■□□□□ 0.91
SHROOM1Q2M3G4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHROOM1Q2M3G4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms