Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB1AP62820 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RAB1AP62820 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
RAB1AP62820 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB1AP62820 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
RAB1AP62820 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB1AP62820 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB1AP62820 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.71■□□□□ 0.1
RAB1AP62820 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
RAB1AP62820 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB1AP62820 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
RAB1AP62820 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
RAB1AP62820 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB1AP62820 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB1AP62820 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.7■□□□□ 0.1
RAB1AP62820 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB1AP62820 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.7■□□□□ 0.1
RAB1AP62820 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB1AP62820 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB1AP62820 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
RAB1AP62820 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB1AP62820 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB1AP62820 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
RAB1AP62820 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
RAB1AP62820 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB1AP62820 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB1AP62820 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB1AP62820 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB1AP62820 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
RAB1AP62820 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB1AP62820 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
RAB1AP62820 CHCHD2P8-201ENST00000429873 447 ntBASIC15.7■□□□□ 0.1
RAB1AP62820 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.7■□□□□ 0.1
RAB1AP62820 TSSC2-201ENST00000450217 709 ntBASIC15.7■□□□□ 0.1
RAB1AP62820 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB1AP62820 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.7■□□□□ 0.1
RAB1AP62820 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.7■□□□□ 0.1
RAB1AP62820 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB1AP62820 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB1AP62820 AC069148.1-201ENST00000608741 768 ntBASIC15.7■□□□□ 0.1
RAB1AP62820 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.7■□□□□ 0.1
RAB1AP62820 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB1AP62820 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB1AP62820 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB1AP62820 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB1AP62820 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB1AP62820 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB1AP62820 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB1AP62820 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
RAB1AP62820 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB1AP62820 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB1AP62820 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB1AP62820 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
RAB1AP62820 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
RAB1AP62820 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.7■□□□□ 0.1
RAB1AP62820 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB1AP62820 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
RAB1AP62820 PKD1P1-201ENST00000458669 6805 ntBASIC15.69■□□□□ 0.1
RAB1AP62820 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB1AP62820 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB1AP62820 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB1AP62820 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
RAB1AP62820 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RAB1AP62820 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB1AP62820 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB1AP62820 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
RAB1AP62820 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB1AP62820 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RAB1AP62820 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.69■□□□□ 0.1
RAB1AP62820 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB1AP62820 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB1AP62820 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB1AP62820 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB1AP62820 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB1AP62820 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RAB1AP62820 AC068472.1-201ENST00000474589 881 ntBASIC15.69■□□□□ 0.1
RAB1AP62820 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB1AP62820 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB1AP62820 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB1AP62820 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RAB1AP62820 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB1AP62820 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RAB1AP62820 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB1AP62820 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.69■□□□□ 0.1
RAB1AP62820 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.69■□□□□ 0.1
RAB1AP62820 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB1AP62820 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.69■□□□□ 0.1
RAB1AP62820 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB1AP62820 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RAB1AP62820 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
RAB1AP62820 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB1AP62820 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
RAB1AP62820 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.68■□□□□ 0.1
RAB1AP62820 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
RAB1AP62820 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB1AP62820 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB1AP62820 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB1AP62820 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.68■□□□□ 0.1
RAB1AP62820 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.68■□□□□ 0.1
RAB1AP62820 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms