Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 AC023274.1-201ENST00000418278 595 ntBASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 AP001160.2-201ENST00000596071 487 ntBASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 AC004706.3-202ENST00000621574 984 ntBASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
GTF2IRD1Q9UHL9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 AC132938.5-201ENST00000624980 1813 ntBASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GTF2IRD1Q9UHL9 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.55■□□□□ 0.72
GTF2IRD1Q9UHL9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GTF2IRD1Q9UHL9 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.55■□□□□ 0.72
GTF2IRD1Q9UHL9 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC19.55■□□□□ 0.72
GTF2IRD1Q9UHL9 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.55■□□□□ 0.72
GTF2IRD1Q9UHL9 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
GTF2IRD1Q9UHL9 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
GTF2IRD1Q9UHL9 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.55■□□□□ 0.72
GTF2IRD1Q9UHL9 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.55■□□□□ 0.72
GTF2IRD1Q9UHL9 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
GTF2IRD1Q9UHL9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GTF2IRD1Q9UHL9 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.55■□□□□ 0.72
GTF2IRD1Q9UHL9 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GTF2IRD1Q9UHL9 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
GTF2IRD1Q9UHL9 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
GTF2IRD1Q9UHL9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GTF2IRD1Q9UHL9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
GTF2IRD1Q9UHL9 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
GTF2IRD1Q9UHL9 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GTF2IRD1Q9UHL9 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GTF2IRD1Q9UHL9 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.55■□□□□ 0.72
GTF2IRD1Q9UHL9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.55■□□□□ 0.72
GTF2IRD1Q9UHL9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.55■□□□□ 0.72
GTF2IRD1Q9UHL9 AC148477.5-201ENST00000625164 1645 ntBASIC19.54■□□□□ 0.72
GTF2IRD1Q9UHL9 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2IRD1Q9UHL9 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2IRD1Q9UHL9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2IRD1Q9UHL9 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2IRD1Q9UHL9 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.54■□□□□ 0.72
GTF2IRD1Q9UHL9 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.54■□□□□ 0.72
GTF2IRD1Q9UHL9 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2IRD1Q9UHL9 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2IRD1Q9UHL9 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
GTF2IRD1Q9UHL9 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GTF2IRD1Q9UHL9 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.54■□□□□ 0.72
GTF2IRD1Q9UHL9 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
GTF2IRD1Q9UHL9 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms