Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC11.9□□□□□ -0.5
LITAFQ99732 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC11.9□□□□□ -0.5
LITAFQ99732 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LITAFQ99732 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC11.9□□□□□ -0.5
LITAFQ99732 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LITAFQ99732 PNMA6B-201ENST00000538162 1200 ntBASIC11.9□□□□□ -0.5
LITAFQ99732 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC11.9□□□□□ -0.5
LITAFQ99732 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC11.9□□□□□ -0.5
LITAFQ99732 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC11.9□□□□□ -0.5
LITAFQ99732 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC11.9□□□□□ -0.5
LITAFQ99732 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LITAFQ99732 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
LITAFQ99732 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
LITAFQ99732 MYB-242ENST00000618728 3545 ntTSL 5 BASIC11.9□□□□□ -0.5
LITAFQ99732 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LITAFQ99732 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC11.9□□□□□ -0.5
LITAFQ99732 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LITAFQ99732 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC11.9□□□□□ -0.5
LITAFQ99732 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LITAFQ99732 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
LITAFQ99732 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LITAFQ99732 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
LITAFQ99732 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
LITAFQ99732 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
LITAFQ99732 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
LITAFQ99732 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
LITAFQ99732 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.51
LITAFQ99732 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.51
LITAFQ99732 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
LITAFQ99732 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC11.89□□□□□ -0.51
LITAFQ99732 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
LITAFQ99732 NBPF21P-201ENST00000425093 1451 ntBASIC11.89□□□□□ -0.51
LITAFQ99732 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC11.89□□□□□ -0.51
LITAFQ99732 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LITAFQ99732 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
LITAFQ99732 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
LITAFQ99732 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC11.89□□□□□ -0.51
LITAFQ99732 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LITAFQ99732 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LITAFQ99732 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC11.89□□□□□ -0.51
LITAFQ99732 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC11.89□□□□□ -0.51
LITAFQ99732 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
LITAFQ99732 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
LITAFQ99732 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC11.89□□□□□ -0.51
LITAFQ99732 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LITAFQ99732 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LITAFQ99732 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LITAFQ99732 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
LITAFQ99732 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC11.89□□□□□ -0.51
LITAFQ99732 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC11.89□□□□□ -0.51
LITAFQ99732 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC11.89□□□□□ -0.51
LITAFQ99732 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC11.89□□□□□ -0.51
LITAFQ99732 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC11.89□□□□□ -0.51
LITAFQ99732 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC11.89□□□□□ -0.51
LITAFQ99732 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC11.89□□□□□ -0.51
LITAFQ99732 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC11.89□□□□□ -0.51
LITAFQ99732 AC008622.2-201ENST00000617006 1229 ntBASIC11.89□□□□□ -0.51
LITAFQ99732 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC11.89□□□□□ -0.51
LITAFQ99732 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LITAFQ99732 AC005052.1-201ENST00000625181 2492 ntBASIC11.89□□□□□ -0.51
LITAFQ99732 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC11.89□□□□□ -0.51
LITAFQ99732 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC11.89□□□□□ -0.51
LITAFQ99732 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
LITAFQ99732 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
LITAFQ99732 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
LITAFQ99732 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC11.89□□□□□ -0.51
LITAFQ99732 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
LITAFQ99732 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC11.89□□□□□ -0.51
LITAFQ99732 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LITAFQ99732 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC11.89□□□□□ -0.51
LITAFQ99732 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LITAFQ99732 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
LITAFQ99732 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC11.89□□□□□ -0.51
LITAFQ99732 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
LITAFQ99732 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LITAFQ99732 AL024508.2-201ENST00000607749 1894 ntBASIC11.89□□□□□ -0.51
LITAFQ99732 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
LITAFQ99732 LYSMD4-203ENST00000378904 2122 ntBASIC11.89□□□□□ -0.51
LITAFQ99732 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
LITAFQ99732 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC11.89□□□□□ -0.51
LITAFQ99732 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LITAFQ99732 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LITAFQ99732 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
LITAFQ99732 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LITAFQ99732 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC11.88□□□□□ -0.51
LITAFQ99732 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LITAFQ99732 HYMAI-201ENST00000635591 3347 ntBASIC11.88□□□□□ -0.51
LITAFQ99732 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LITAFQ99732 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
LITAFQ99732 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
LITAFQ99732 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LITAFQ99732 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC11.88□□□□□ -0.51
LITAFQ99732 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LITAFQ99732 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LITAFQ99732 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
LITAFQ99732 CYP51A1P1-201ENST00000492267 1507 ntBASIC11.88□□□□□ -0.51
LITAFQ99732 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC11.88□□□□□ -0.51
LITAFQ99732 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LITAFQ99732 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC11.88□□□□□ -0.51
LITAFQ99732 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms