Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 AL355075.4-201ENST00000554988 638 ntBASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 NAPSB-206ENST00000562112 1266 ntBASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 AC008687.5-201ENST00000593746 558 ntBASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
MRPL55Q7Z7F7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 AP000997.3-201ENST00000623333 2250 ntBASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 MST1L-201ENST00000442552 2185 ntBASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 AC010240.3-201ENST00000607688 395 ntBASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 AC093010.1-201ENST00000473625 1624 ntBASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
MRPL55Q7Z7F7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
MRPL55Q7Z7F7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
MRPL55Q7Z7F7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
MRPL55Q7Z7F7 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
MRPL55Q7Z7F7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
MRPL55Q7Z7F7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
MRPL55Q7Z7F7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC11.52□□□□□ -0.56
MRPL55Q7Z7F7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
MRPL55Q7Z7F7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
MRPL55Q7Z7F7 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC11.52□□□□□ -0.57
MRPL55Q7Z7F7 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms