Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 AC063926.3-201ENST00000624734 5658 ntBASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 LYSMD4-203ENST00000378904 2122 ntBASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 AC144831.1-201ENST00000573312 2656 ntBASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TMEM88Q6PEY1 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 AC024909.3-201ENST00000611513 2257 ntBASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 AC006116.8-202ENST00000587620 1550 ntBASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.47□□□□□ -0.09
TMEM88Q6PEY1 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TMEM88Q6PEY1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.46□□□□□ -0.09
TMEM88Q6PEY1 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM88Q6PEY1 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM88Q6PEY1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.46□□□□□ -0.09
TMEM88Q6PEY1 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM88Q6PEY1 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.46□□□□□ -0.09
TMEM88Q6PEY1 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.46□□□□□ -0.09
TMEM88Q6PEY1 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TMEM88Q6PEY1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM88Q6PEY1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM88Q6PEY1 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC14.46□□□□□ -0.09
TMEM88Q6PEY1 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TMEM88Q6PEY1 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM88Q6PEY1 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.09
TMEM88Q6PEY1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM88Q6PEY1 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TMEM88Q6PEY1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TMEM88Q6PEY1 PPP1R14BP2-201ENST00000426284 444 ntBASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms