Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 AC097374.2-201ENST00000618617 1306 ntBASIC16.81■□□□□ 0.28
RAB38P57729 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB38P57729 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RAB38P57729 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
RAB38P57729 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
RAB38P57729 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
RAB38P57729 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB38P57729 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.81■□□□□ 0.28
RAB38P57729 IGHV3-47-201ENST00000425060 335 ntBASIC16.81■□□□□ 0.28
RAB38P57729 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB38P57729 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.81■□□□□ 0.28
RAB38P57729 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RAB38P57729 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB38P57729 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB38P57729 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
RAB38P57729 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB38P57729 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
RAB38P57729 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB38P57729 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RAB38P57729 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB38P57729 NSUN5P1-202ENST00000421140 1535 ntBASIC16.8■□□□□ 0.28
RAB38P57729 NSUN5P2-203ENST00000457352 1529 ntBASIC16.8■□□□□ 0.28
RAB38P57729 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB38P57729 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB38P57729 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB38P57729 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB38P57729 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB38P57729 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB38P57729 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
RAB38P57729 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB38P57729 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB38P57729 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RAB38P57729 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB38P57729 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB38P57729 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB38P57729 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.8■□□□□ 0.28
RAB38P57729 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB38P57729 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB38P57729 MINOS1P3-201ENST00000457048 203 ntBASIC16.8■□□□□ 0.28
RAB38P57729 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
RAB38P57729 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.8■□□□□ 0.28
RAB38P57729 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.8■□□□□ 0.28
RAB38P57729 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB38P57729 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB38P57729 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB38P57729 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.8■□□□□ 0.28
RAB38P57729 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB38P57729 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB38P57729 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB38P57729 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB38P57729 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB38P57729 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RAB38P57729 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB38P57729 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB38P57729 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB38P57729 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RAB38P57729 AC007613.1-201ENST00000572811 2597 ntBASIC16.8■□□□□ 0.28
RAB38P57729 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RAB38P57729 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB38P57729 AC009949.1-201ENST00000623048 1830 ntBASIC16.8■□□□□ 0.28
RAB38P57729 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RAB38P57729 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB38P57729 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RAB38P57729 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB38P57729 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB38P57729 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB38P57729 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB38P57729 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB38P57729 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB38P57729 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
RAB38P57729 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB38P57729 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB38P57729 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RAB38P57729 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB38P57729 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB38P57729 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB38P57729 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB38P57729 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB38P57729 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.79■□□□□ 0.28
RAB38P57729 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB38P57729 AC009533.2-201ENST00000543664 586 ntBASIC16.79■□□□□ 0.28
RAB38P57729 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB38P57729 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.79■□□□□ 0.28
RAB38P57729 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
RAB38P57729 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB38P57729 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB38P57729 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB38P57729 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB38P57729 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB38P57729 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB38P57729 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB38P57729 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB38P57729 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB38P57729 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB38P57729 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB38P57729 HTR7P1-202ENST00000624664 4411 ntBASIC16.78■□□□□ 0.28
RAB38P57729 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB38P57729 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB38P57729 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB38P57729 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms