Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PAX9P55771 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.36□□□□□ -0.11
PAX9P55771 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PAX9P55771 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.36□□□□□ -0.11
PAX9P55771 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PAX9P55771 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PAX9P55771 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PAX9P55771 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PAX9P55771 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PAX9P55771 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PAX9P55771 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.36□□□□□ -0.11
PAX9P55771 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.36□□□□□ -0.11
PAX9P55771 AC009065.1-201ENST00000564055 1225 ntBASIC14.36□□□□□ -0.11
PAX9P55771 OR6D1P-202ENST00000641007 5290 ntBASIC14.36□□□□□ -0.11
PAX9P55771 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PAX9P55771 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PAX9P55771 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PAX9P55771 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PAX9P55771 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PAX9P55771 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PAX9P55771 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PAX9P55771 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
PAX9P55771 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PAX9P55771 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.36□□□□□ -0.11
PAX9P55771 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PAX9P55771 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
PAX9P55771 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
PAX9P55771 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PAX9P55771 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PAX9P55771 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
PAX9P55771 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PAX9P55771 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.35□□□□□ -0.11
PAX9P55771 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PAX9P55771 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.35□□□□□ -0.11
PAX9P55771 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC14.35□□□□□ -0.11
PAX9P55771 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PAX9P55771 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PAX9P55771 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PAX9P55771 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PAX9P55771 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PAX9P55771 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PAX9P55771 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PAX9P55771 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PAX9P55771 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
PAX9P55771 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PAX9P55771 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.35□□□□□ -0.11
PAX9P55771 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
PAX9P55771 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC14.35□□□□□ -0.11
PAX9P55771 SLC25A1P4-201ENST00000567977 778 ntBASIC14.35□□□□□ -0.11
PAX9P55771 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
PAX9P55771 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PAX9P55771 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PAX9P55771 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PAX9P55771 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PAX9P55771 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.35□□□□□ -0.11
PAX9P55771 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.35□□□□□ -0.11
PAX9P55771 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PAX9P55771 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PAX9P55771 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PAX9P55771 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PAX9P55771 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PAX9P55771 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PAX9P55771 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PAX9P55771 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PAX9P55771 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PAX9P55771 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.34□□□□□ -0.11
PAX9P55771 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PAX9P55771 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PAX9P55771 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.34□□□□□ -0.11
PAX9P55771 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
PAX9P55771 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.34□□□□□ -0.11
PAX9P55771 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PAX9P55771 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.34□□□□□ -0.11
PAX9P55771 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.34□□□□□ -0.11
PAX9P55771 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PAX9P55771 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PAX9P55771 CICP6-201ENST00000457191 2729 ntBASIC14.34□□□□□ -0.11
PAX9P55771 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PAX9P55771 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PAX9P55771 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PAX9P55771 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PAX9P55771 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PAX9P55771 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PAX9P55771 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.34□□□□□ -0.11
PAX9P55771 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PAX9P55771 AC104390.1-201ENST00000555663 520 ntBASIC14.34□□□□□ -0.11
PAX9P55771 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC14.34□□□□□ -0.11
PAX9P55771 MIR3180-4-201ENST00000582223 153 ntBASIC14.34□□□□□ -0.11
PAX9P55771 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC14.34□□□□□ -0.11
PAX9P55771 AC006058.3-201ENST00000606217 1069 ntBASIC14.34□□□□□ -0.11
PAX9P55771 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PAX9P55771 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
PAX9P55771 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.34□□□□□ -0.11
PAX9P55771 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PAX9P55771 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PAX9P55771 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PAX9P55771 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PAX9P55771 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PAX9P55771 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PAX9P55771 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms