Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.24■□□□□ 0.836e-7■■□□□ 14.3
MATR3P43243 DGCR2-203ENST00000467659 2459 ntTSL 519.2■□□□□ 0.666e-7■■□□□ 14.3
MATR3P43243 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.63■□□□□ 0.575e-6■■□□□ 14.3
MATR3P43243 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.446e-7■■□□□ 14.3
MATR3P43243 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.426e-7■■□□□ 14.3
MATR3P43243 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.396e-7■■□□□ 14.3
MATR3P43243 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.376e-7■■□□□ 14.3
MATR3P43243 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.346e-7■■□□□ 14.3
MATR3P43243 STX3-206ENST00000533637 1024 ntTSL 216.74■□□□□ 0.275e-6■■□□□ 14.3
MATR3P43243 SSX2IP-202ENST00000422026 759 ntTSL 315.69■□□□□ 0.16e-7■■□□□ 14.3
MATR3P43243 RHEB-207ENST00000496004 744 ntTSL 2 BASIC15.67■□□□□ 0.16e-7■■□□□ 14.3
MATR3P43243 STX3-207ENST00000633708 3111 ntTSL 5 BASIC15.4■□□□□ 0.065e-6■■□□□ 14.3
MATR3P43243 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC14.98□□□□□ -0.012e-6■■□□□ 14.3
MATR3P43243 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC14.75□□□□□ -0.056e-7■■□□□ 14.3
MATR3P43243 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.096e-7■■□□□ 14.3
MATR3P43243 NUP62CL-202ENST00000421752 618 ntTSL 214.35□□□□□ -0.112e-6■■□□□ 14.3
MATR3P43243 NUP62CL-204ENST00000484614 1515 ntTSL 213.79□□□□□ -0.22e-6■■□□□ 14.3
MATR3P43243 DGCR2-207ENST00000608548 518 ntTSL 213.21□□□□□ -0.296e-7■■□□□ 14.3
MATR3P43243 SSX2IP-206ENST00000476905 2272 ntTSL 29.79□□□□□ -0.846e-7■■□□□ 14.3
MATR3P43243 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC9.23□□□□□ -0.936e-7■■□□□ 14.3
MATR3P43243 STX3-208ENST00000641815 3236 ntBASIC5.69□□□□□ -1.55e-6■■□□□ 14.3
MATR3P43243 RHEB-203ENST00000470370 501 ntTSL 54.73□□□□□ -1.656e-7■■□□□ 14.3
MATR3P43243 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.19□□□□□ -1.745e-6■■□□□ 14.3
MATR3P43243 DENND4C-208ENST00000602708 551 ntTSL 42.19□□□□□ -2.066e-7■■□□□ 14.3
MATR3P43243 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.225e-10■■□□□ 14.2
MATR3P43243 USP10-202ENST00000540269 3070 ntTSL 1 (best)13.6□□□□□ -0.235e-10■■□□□ 14.2
MATR3P43243 USP10-207ENST00000563048 1315 ntTSL 213.03□□□□□ -0.325e-10■■□□□ 14.2
MATR3P43243 USP10-219ENST00000570191 2717 ntTSL 2 BASIC12.82□□□□□ -0.365e-10■■□□□ 14.2
MATR3P43243 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.63□□□□□ -1.192e-6■■□□□ 14.2
MATR3P43243 USP10-217ENST00000569925 572 ntTSL 36.56□□□□□ -1.365e-10■■□□□ 14.2
MATR3P43243 ACACA-233ENST00000614450 591 ntTSL 46.45□□□□□ -1.385e-10■■□□□ 14.2
MATR3P43243 USP10-214ENST00000567526 330 ntTSL 36.34□□□□□ -1.395e-10■■□□□ 14.2
MATR3P43243 CHD9-201ENST00000219084 8739 ntTSL 1 (best)4.99□□□□□ -1.614e-11■■□□□ 14.2
MATR3P43243 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.64■■□□□ 1.386e-7■■□□□ 14.2
MATR3P43243 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.87□□□□□ -1.476e-7■■□□□ 14.2
MATR3P43243 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.78□□□□□ -1.646e-7■■□□□ 14.2
MATR3P43243 CFDP1-208ENST00000569341 454 ntTSL 34.45□□□□□ -1.72e-6■■□□□ 14.2
MATR3P43243 CFDP1-211ENST00000612761 395 ntTSL 33.76□□□□□ -1.812e-6■■□□□ 14.2
MATR3P43243 RAPGEF5-208ENST00000471484 589 ntTSL 411.38□□□□□ -0.592e-6■■□□□ 14.2
MATR3P43243 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC26.68■■□□□ 1.861e-6■■□□□ 14.2
MATR3P43243 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC26.68■■□□□ 1.861e-6■■□□□ 14.2
MATR3P43243 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.091e-6■■□□□ 14.2
MATR3P43243 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.25■□□□□ 0.991e-6■■□□□ 14.2
MATR3P43243 FOXP4-201ENST00000307972 3745 ntTSL 1 (best) BASIC13.16□□□□□ -0.31e-6■■□□□ 14.2
MATR3P43243 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.646e-7■■□□□ 14.2
MATR3P43243 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC15.29■□□□□ 0.046e-7■■□□□ 14.2
MATR3P43243 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC14.89□□□□□ -0.036e-7■■□□□ 14.2
MATR3P43243 UBE2V1-203ENST00000371674 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.276e-7■■□□□ 14.2
MATR3P43243 UBE2V1-206ENST00000415862 2387 ntTSL 1 (best) BASIC11.79□□□□□ -0.526e-7■■□□□ 14.2
MATR3P43243 UBE2V1-217ENST00000486653 563 ntTSL 411.03□□□□□ -0.646e-7■■□□□ 14.2
MATR3P43243 UBE2V1-218ENST00000490289 628 ntTSL 310.45□□□□□ -0.746e-7■■□□□ 14.2
MATR3P43243 UBE2V1-223ENST00000617119 2432 ntTSL 4 BASIC9.78□□□□□ -0.846e-7■■□□□ 14.2
MATR3P43243 UBE2V1-205ENST00000396059 1983 ntTSL 1 (best)9.58□□□□□ -0.886e-7■■□□□ 14.2
MATR3P43243 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC9.2□□□□□ -0.946e-7■■□□□ 14.2
MATR3P43243 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC8.31□□□□□ -1.086e-7■■□□□ 14.2
MATR3P43243 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC8.29□□□□□ -1.086e-7■■□□□ 14.2
MATR3P43243 UBE2V1-215ENST00000473860 639 ntTSL 37.72□□□□□ -1.176e-7■■□□□ 14.2
MATR3P43243 UBE2V1-211ENST00000467839 566 ntTSL 27.39□□□□□ -1.236e-7■■□□□ 14.2
MATR3P43243 UBE2V1-208ENST00000432266 569 ntTSL 46.64□□□□□ -1.356e-7■■□□□ 14.2
MATR3P43243 UBE2V1-216ENST00000483534 1155 ntTSL 1 (best)5.8□□□□□ -1.486e-7■■□□□ 14.2
MATR3P43243 UBE2V1-221ENST00000493090 563 ntTSL 45.49□□□□□ -1.536e-7■■□□□ 14.2
MATR3P43243 UBE2V1-210ENST00000462217 1095 ntTSL 54.87□□□□□ -1.636e-7■■□□□ 14.2
MATR3P43243 UBE2V1-219ENST00000490555 549 ntTSL 44.83□□□□□ -1.646e-7■■□□□ 14.2
MATR3P43243 UBE2V1-209ENST00000461960 649 ntTSL 54.55□□□□□ -1.686e-7■■□□□ 14.2
MATR3P43243 UBE2V1-213ENST00000470565 728 ntTSL 34.36□□□□□ -1.716e-7■■□□□ 14.2
MATR3P43243 UBE2V1-214ENST00000472923 421 ntTSL 53.03□□□□□ -1.926e-7■■□□□ 14.2
MATR3P43243 UBE2V1-220ENST00000492371 535 ntTSL 32.97□□□□□ -1.936e-7■■□□□ 14.2
MATR3P43243 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.2■□□□□ 0.187e-7■■□□□ 14.2
MATR3P43243 PHF3-204ENST00000481385 2787 ntTSL 215.44■□□□□ 0.067e-7■■□□□ 14.2
MATR3P43243 PHF3-212ENST00000515594 3074 ntTSL 214.5□□□□□ -0.097e-7■■□□□ 14.2
MATR3P43243 PHF3-205ENST00000494284 2854 ntTSL 213.81□□□□□ -0.27e-7■■□□□ 14.2
MATR3P43243 PHF3-201ENST00000262043 8233 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.487e-7■■□□□ 14.2
MATR3P43243 PHF3-208ENST00000506783 3700 ntTSL 1 (best)11.04□□□□□ -0.647e-7■■□□□ 14.2
MATR3P43243 PHF3-210ENST00000509876 7124 ntTSL 1 (best)5.96□□□□□ -1.467e-7■■□□□ 14.2
MATR3P43243 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.797e-7■■□□□ 14.2
MATR3P43243 MLEC-202ENST00000412616 841 ntTSL 3 BASIC28.64■■■□□ 2.185e-6■■□□□ 14.2
MATR3P43243 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC24.92■■□□□ 1.585e-13■■□□□ 14.2
MATR3P43243 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.35e-9■■□□□ 14.2
MATR3P43243 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.6■■□□□ 1.215e-9■■□□□ 14.2
MATR3P43243 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.195e-9■■□□□ 14.2
MATR3P43243 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.165e-13■■□□□ 14.2
MATR3P43243 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.89■□□□□ 0.615e-9■■□□□ 14.2
MATR3P43243 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.08■□□□□ 0.325e-9■■□□□ 14.2
MATR3P43243 TEAD2-206ENST00000596757 579 ntTSL 516.92■□□□□ 0.35e-9■■□□□ 14.2
MATR3P43243 SYNJ2-203ENST00000367113 939 ntTSL 28.68□□□□□ -1.022e-6■■□□□ 14.2
MATR3P43243 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC8.34□□□□□ -1.075e-13■■□□□ 14.2
MATR3P43243 ACVR2A-203ENST00000462659 746 ntTSL 317.71■□□□□ 0.436e-8■■□□□ 14.1
MATR3P43243 ACVR2A-205ENST00000487959 274 ntTSL 415.42■□□□□ 0.066e-8■■□□□ 14.1
MATR3P43243 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.016e-8■■□□□ 14.1
MATR3P43243 ACVR2A-202ENST00000404590 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.316e-8■■□□□ 14.1
MATR3P43243 ACVR2A-207ENST00000535787 5166 ntTSL 2 BASIC10.52□□□□□ -0.736e-8■■□□□ 14.1
MATR3P43243 ACVR2A-204ENST00000465329 993 ntTSL 25.83□□□□□ -1.486e-8■■□□□ 14.1
MATR3P43243 GBE1-201ENST00000429644 3461 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.181e-6■■□□□ 14.1
MATR3P43243 HDHD2-212ENST00000591671 557 ntTSL 221.06■□□□□ 0.962e-6■■□□□ 14.1
MATR3P43243 HDHD2-207ENST00000588940 546 ntTSL 420.53■□□□□ 0.882e-6■■□□□ 14.1
MATR3P43243 HDHD2-210ENST00000591268 576 ntTSL 420.26■□□□□ 0.832e-6■■□□□ 14.1
MATR3P43243 HDHD2-213ENST00000592591 559 ntTSL 418.45■□□□□ 0.542e-6■■□□□ 14.1
MATR3P43243 HDHD2-211ENST00000591480 569 ntTSL 418.45■□□□□ 0.542e-6■■□□□ 14.1
MATR3P43243 HDHD2-203ENST00000587388 566 ntTSL 318.41■□□□□ 0.542e-6■■□□□ 14.1
MATR3P43243 HDHD2-208ENST00000590481 569 ntTSL 418.41■□□□□ 0.542e-6■■□□□ 14.1
Retrieved 100 of 16,209 protein–RNA pairs in 83.8 ms