RNA–Protein interactions for RNA: ENST00000588940.5

HDHD2-207, Transcript of haloacid dehalogenase like hydrolase domain containing 2, humanhuman

TSL 4

Gene HDHD2, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD2-207ENST00000588940 NISCHQ9Y2I1 1504 aa44.87■■■■■ 4.77
HDHD2-207ENST00000588940 CCDC180Q9P1Z9 1646 aa39.79■■■■□ 3.96
HDHD2-207ENST00000588940 ABCC9O60706 1549 aa38.5■■■■□ 3.75
HDHD2-207ENST00000588940 ZCCHC6Q5VYS8 1495 aaKnown RBP37.44■■■■□ 3.58
HDHD2-207ENST00000588940 NACADO15069 1562 aa37.34■■■■□ 3.57
HDHD2-207ENST00000588940 DCAF8L2P0C7V8 631 aa37.32■■■■□ 3.56
HDHD2-207ENST00000588940 RB1CC1Q8TDY2 1594 aa37.29■■■■□ 3.56
HDHD2-207ENST00000588940 MYO15BQ96JP2 1530 aa37.26■■■■□ 3.56
HDHD2-207ENST00000588940 DCAF1Q9Y4B6 1507 aa37.2■■■■□ 3.55
HDHD2-207ENST00000588940 UNC13AQ9UPW8 1703 aa36.35■■■■□ 3.41
HDHD2-207ENST00000588940 SCRIBQ14160 1630 aa36.23■■■■□ 3.39
HDHD2-207ENST00000588940 BICRAQ9NZM4 1560 aa36.06■■■■□ 3.36
HDHD2-207ENST00000588940 PABPN1Q86U42 306 aaKnown RBP eCLIP36.02■■■■□ 3.36
HDHD2-207ENST00000588940 SHROOM4Q9ULL8 1493 aa35.86■■■■□ 3.33
HDHD2-207ENST00000588940 DNAJC5BQ9UF47 199 aa35.6■■■■□ 3.29
HDHD2-207ENST00000588940 EIF4G1Q04637 1599 aaKnown RBP35.12■■■■□ 3.21
HDHD2-207ENST00000588940 CC2D2AQ9P2K1 1620 aa34.88■■■■□ 3.17
HDHD2-207ENST00000588940 CECR2Q9BXF3 1484 aa34.84■■■■□ 3.17
HDHD2-207ENST00000588940 BAZ1AQ9NRL2 1556 aaPredicted RBP34.79■■■■□ 3.16
HDHD2-207ENST00000588940 SMARCA4P51532 1647 aa34.73■■■■□ 3.15
HDHD2-207ENST00000588940 MROH2BQ7Z745 1585 aa34.53■■■■□ 3.12
HDHD2-207ENST00000588940 SMARCA2P51531 1590 aa34.49■■■■□ 3.11
HDHD2-207ENST00000588940 ATAD2BQ9ULI0 1458 aa34.46■■■■□ 3.11
HDHD2-207ENST00000588940 NCAPD3P42695 1498 aa34.43■■■■□ 3.1
HDHD2-207ENST00000588940 PEG3Q9GZU2 1588 aa34.43■■■■□ 3.1
HDHD2-207ENST00000588940 HMGXB3Q12766 1538 aa34.3■■■■□ 3.08
HDHD2-207ENST00000588940 RSF1Q96T23 1441 aaPredicted RBP34.3■■■■□ 3.08
HDHD2-207ENST00000588940 BAZ1BQ9UIG0 1483 aaKnown RBP34.22■■■■□ 3.07
HDHD2-207ENST00000588940 WIZO95785 1651 aa34.18■■■■□ 3.06
HDHD2-207ENST00000588940 TOP2AP11388 1531 aaKnown RBP33.89■■■■□ 3.02
HDHD2-207ENST00000588940 SUPT5HO00267 1087 aaKnown RBP33.65■■■□□ 2.98
HDHD2-207ENST00000588940 LAMC3Q9Y6N6 1575 aa33.48■■■□□ 2.95
HDHD2-207ENST00000588940 CCDC88BA6NC98 1476 aa33.46■■■□□ 2.95
HDHD2-207ENST00000588940 CADPSQ9ULU8 1353 aa33.44■■■□□ 2.94
HDHD2-207ENST00000588940 NESP48681 1621 aa33.39■■■□□ 2.94
HDHD2-207ENST00000588940 CFTRP13569 1480 aa33.31■■■□□ 2.92
HDHD2-207ENST00000588940 PDS5BQ9NTI5 1447 aa33.26■■■□□ 2.91
HDHD2-207ENST00000588940 ERCC6Q03468 1493 aa33.23■■■□□ 2.91
HDHD2-207ENST00000588940 PRDM2Q13029 1718 aa33.09■■■□□ 2.89
HDHD2-207ENST00000588940 KIF21AQ7Z4S6 1674 aa33.04■■■□□ 2.88
HDHD2-207ENST00000588940 FANCD2Q9BXW9 1451 aa33.03■■■□□ 2.88
HDHD2-207ENST00000588940 CEP164Q9UPV0 1460 aa32.98■■■□□ 2.87
HDHD2-207ENST00000588940 CUX2O14529 1486 aa32.9■■■□□ 2.86
HDHD2-207ENST00000588940 THOC2Q8NI27 1593 aaKnown RBP32.86■■■□□ 2.85
HDHD2-207ENST00000588940 MRC2Q9UBG0 1479 aa32.86■■■□□ 2.85
HDHD2-207ENST00000588940 WDR62O43379 1518 aa32.72■■■□□ 2.83
HDHD2-207ENST00000588940 ABCC8Q09428 1581 aa32.66■■■□□ 2.82
HDHD2-207ENST00000588940 URB2Q14146 1524 aaKnown RBP32.64■■■□□ 2.82
HDHD2-207ENST00000588940 DNMBPQ6XZF7 1577 aa32.54■■■□□ 2.8
HDHD2-207ENST00000588940 TOPBP1Q92547 1522 aa32.53■■■□□ 2.8
HDHD2-207ENST00000588940 CUX1P39880 1505 aa32.39■■■□□ 2.78
HDHD2-207ENST00000588940 WRNQ14191 1432 aaPredicted RBP eCLIP32.35■■■□□ 2.77
HDHD2-207ENST00000588940 IFT140Q96RY7 1462 aa32.29■■■□□ 2.76
HDHD2-207ENST00000588940 POLA1P09884 1462 aaPredicted RBP32.27■■■□□ 2.76
HDHD2-207ENST00000588940 FGD5Q6ZNL6 1462 aa32.24■■■□□ 2.75
HDHD2-207ENST00000588940 TOP2BQ02880 1626 aa32.24■■■□□ 2.75
HDHD2-207ENST00000588940 BIVM-ERCC5R4GMW8 1640 aa32.24■■■□□ 2.75
HDHD2-207ENST00000588940 DNAJC5Q9H3Z4 198 aa32.21■■■□□ 2.75
HDHD2-207ENST00000588940 SYNJ1O43426 1573 aa32.19■■■□□ 2.74
HDHD2-207ENST00000588940 SOGA1O94964 1423 aa32.17■■■□□ 2.74
HDHD2-207ENST00000588940 TARBP1Q13395 1621 aaKnown RBP32.15■■■□□ 2.74
HDHD2-207ENST00000588940 RAD54L2Q9Y4B4 1467 aa32.09■■■□□ 2.73
HDHD2-207ENST00000588940 ZNF608Q9ULD9 1512 aaPredicted RBP32.02■■■□□ 2.72
HDHD2-207ENST00000588940 WDR97A6NE52 1622 aa32.02■■■□□ 2.72
HDHD2-207ENST00000588940 ABCA10Q8WWZ4 1543 aa31.98■■■□□ 2.71
HDHD2-207ENST00000588940 EIF4G3O43432 1585 aaKnown RBP31.94■■■□□ 2.7
HDHD2-207ENST00000588940 TDRD9Q8NDG6 1382 aaKnown RBP31.91■■■□□ 2.7
HDHD2-207ENST00000588940 AQRO60306 1485 aaKnown RBP eCLIP31.91■■■□□ 2.7
HDHD2-207ENST00000588940 TRIM41Q8WV44 630 aa31.84■■■□□ 2.69
HDHD2-207ENST00000588940 GAPVD1Q14C86 1478 aa31.81■■■□□ 2.68
HDHD2-207ENST00000588940 ABCA5Q8WWZ7 1642 aa31.79■■■□□ 2.68
HDHD2-207ENST00000588940 GRIN2BQ13224 1484 aa31.78■■■□□ 2.68
HDHD2-207ENST00000588940 PBRM1Q86U86 1689 aa31.7■■■□□ 2.66
HDHD2-207ENST00000588940 KIF27Q86VH2 1401 aa31.68■■■□□ 2.66
HDHD2-207ENST00000588940 MAGI1Q96QZ7 1491 aaPredicted RBP31.67■■■□□ 2.66
HDHD2-207ENST00000588940 SNAPC4Q5SXM2 1469 aa31.64■■■□□ 2.66
HDHD2-207ENST00000588940 ERICH3Q5RHP9 1530 aa31.63■■■□□ 2.65
HDHD2-207ENST00000588940 CHIC1Q5VXU3 224 aa31.62■■■□□ 2.65
HDHD2-207ENST00000588940 SYNJ2O15056 1496 aa31.52■■■□□ 2.64
HDHD2-207ENST00000588940 OSCARQ8IYS5 282 aa31.5■■■□□ 2.63
HDHD2-207ENST00000588940 CHMP7Q8WUX9 453 aaPredicted RBP31.5■■■□□ 2.63
HDHD2-207ENST00000588940 FBLN2P98095 1184 aa31.48■■■□□ 2.63
HDHD2-207ENST00000588940 FHAD1B1AJZ9 1412 aa31.48■■■□□ 2.63
HDHD2-207ENST00000588940 CHD1O14646 1710 aa31.47■■■□□ 2.63
HDHD2-207ENST00000588940 IGF1RP08069 1367 aa31.47■■■□□ 2.63
HDHD2-207ENST00000588940 ADAMTS12P58397 1594 aa31.47■■■□□ 2.63
HDHD2-207ENST00000588940 CUL7Q14999 1698 aa31.41■■■□□ 2.62
HDHD2-207ENST00000588940 RUSC2Q8N2Y8 1516 aa31.37■■■□□ 2.61
HDHD2-207ENST00000588940 EEA1Q15075 1411 aa31.35■■■□□ 2.61
HDHD2-207ENST00000588940 GRIN2AQ12879 1464 aa31.34■■■□□ 2.61
HDHD2-207ENST00000588940 CARMIL1Q5VZK9 1371 aa31.31■■■□□ 2.6
HDHD2-207ENST00000588940 CSRNP3Q8WYN3 585 aa31.2■■■□□ 2.59
HDHD2-207ENST00000588940 NUP160Q12769 1436 aa31.2■■■□□ 2.59
HDHD2-207ENST00000588940 RAPGEF2Q9Y4G8 1499 aa31.17■■■□□ 2.58
HDHD2-207ENST00000588940 CLASP1Q7Z460 1538 aa31.15■■■□□ 2.58
HDHD2-207ENST00000588940 CEP170Q5SW79 1584 aa31.13■■■□□ 2.57
HDHD2-207ENST00000588940 PRXQ9BXM0 1461 aa31.12■■■□□ 2.57
HDHD2-207ENST00000588940 FAM9AQ8IZU1 332 aaPredicted RBP31.07■■■□□ 2.56
HDHD2-207ENST00000588940 RIMBP3CA6NJZ7 1639 aa31.06■■■□□ 2.56
HDHD2-207ENST00000588940 RIMBP3BA6NNM3 1639 aa31.06■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms