Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CALR3Q96L12 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CALR3Q96L12 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CALR3Q96L12 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CALR3Q96L12 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CALR3Q96L12 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
CALR3Q96L12 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CALR3Q96L12 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CALR3Q96L12 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CALR3Q96L12 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CALR3Q96L12 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CALR3Q96L12 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CALR3Q96L12 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.95■□□□□ 0.62
CALR3Q96L12 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CALR3Q96L12 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.95■□□□□ 0.62
CALR3Q96L12 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CALR3Q96L12 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CALR3Q96L12 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CALR3Q96L12 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.95■□□□□ 0.62
CALR3Q96L12 HMGA1P5-201ENST00000412453 271 ntBASIC18.95■□□□□ 0.62
CALR3Q96L12 TSPY7P-201ENST00000431358 1114 ntBASIC18.95■□□□□ 0.62
CALR3Q96L12 KRT18P65-201ENST00000439811 1286 ntBASIC18.95■□□□□ 0.62
CALR3Q96L12 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.95■□□□□ 0.62
CALR3Q96L12 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.95■□□□□ 0.62
CALR3Q96L12 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.95■□□□□ 0.62
CALR3Q96L12 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
CALR3Q96L12 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.95■□□□□ 0.62
CALR3Q96L12 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.95■□□□□ 0.62
CALR3Q96L12 AP006294.2-201ENST00000641667 209 ntBASIC18.95■□□□□ 0.62
CALR3Q96L12 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.95■□□□□ 0.62
CALR3Q96L12 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.95■□□□□ 0.62
CALR3Q96L12 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.95■□□□□ 0.62
CALR3Q96L12 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.95■□□□□ 0.62
CALR3Q96L12 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CALR3Q96L12 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.95■□□□□ 0.62
CALR3Q96L12 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CALR3Q96L12 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.95■□□□□ 0.62
CALR3Q96L12 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.95■□□□□ 0.62
CALR3Q96L12 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.95■□□□□ 0.62
CALR3Q96L12 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CALR3Q96L12 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CALR3Q96L12 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CALR3Q96L12 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.95■□□□□ 0.62
CALR3Q96L12 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CALR3Q96L12 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CALR3Q96L12 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CALR3Q96L12 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CALR3Q96L12 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CALR3Q96L12 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CALR3Q96L12 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CALR3Q96L12 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CALR3Q96L12 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.94■□□□□ 0.62
CALR3Q96L12 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CALR3Q96L12 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CALR3Q96L12 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CALR3Q96L12 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.94■□□□□ 0.62
CALR3Q96L12 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.94■□□□□ 0.62
CALR3Q96L12 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.94■□□□□ 0.62
CALR3Q96L12 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.94■□□□□ 0.62
CALR3Q96L12 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.94■□□□□ 0.62
CALR3Q96L12 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CALR3Q96L12 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CALR3Q96L12 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CALR3Q96L12 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CALR3Q96L12 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CALR3Q96L12 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CALR3Q96L12 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.94■□□□□ 0.62
CALR3Q96L12 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.94■□□□□ 0.62
CALR3Q96L12 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CALR3Q96L12 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CALR3Q96L12 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.94■□□□□ 0.62
CALR3Q96L12 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CALR3Q96L12 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CALR3Q96L12 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
CALR3Q96L12 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CALR3Q96L12 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CALR3Q96L12 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CALR3Q96L12 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CALR3Q96L12 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CALR3Q96L12 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CALR3Q96L12 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
CALR3Q96L12 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CALR3Q96L12 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CALR3Q96L12 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.93■□□□□ 0.62
CALR3Q96L12 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CALR3Q96L12 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CALR3Q96L12 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CALR3Q96L12 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CALR3Q96L12 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CALR3Q96L12 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CALR3Q96L12 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.93■□□□□ 0.62
CALR3Q96L12 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CALR3Q96L12 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CALR3Q96L12 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CALR3Q96L12 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CALR3Q96L12 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CALR3Q96L12 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CALR3Q96L12 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CALR3Q96L12 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.93■□□□□ 0.62
CALR3Q96L12 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms