Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHD1LQ86WJ1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 SIRPAP1-201ENST00000448467 1770 ntBASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 AK4P3-201ENST00000418260 669 ntBASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 HOMER2P1-201ENST00000455653 964 ntBASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 AL359075.1-203ENST00000462729 1002 ntBASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 LINC01023-201ENST00000606054 436 ntBASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 FGF14-AS2-201ENST00000606448 1074 ntBASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHD1LQ86WJ1 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHD1LQ86WJ1 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC22.11■■□□□ 1.13
CHD1LQ86WJ1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC22.11■■□□□ 1.13
CHD1LQ86WJ1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC22.11■■□□□ 1.13
CHD1LQ86WJ1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHD1LQ86WJ1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CHD1LQ86WJ1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
CHD1LQ86WJ1 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CHD1LQ86WJ1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CHD1LQ86WJ1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC22.11■■□□□ 1.13
CHD1LQ86WJ1 TSPY12P-201ENST00000421279 868 ntBASIC22.11■■□□□ 1.13
CHD1LQ86WJ1 AC112907.2-201ENST00000448639 330 ntBASIC22.11■■□□□ 1.13
CHD1LQ86WJ1 AC104076.2-201ENST00000448912 469 ntBASIC22.11■■□□□ 1.13
CHD1LQ86WJ1 AP003733.1-201ENST00000491725 852 ntBASIC22.11■■□□□ 1.13
CHD1LQ86WJ1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CHD1LQ86WJ1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC22.11■■□□□ 1.13
CHD1LQ86WJ1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC22.11■■□□□ 1.13
CHD1LQ86WJ1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHD1LQ86WJ1 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC22.11■■□□□ 1.13
CHD1LQ86WJ1 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHD1LQ86WJ1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHD1LQ86WJ1 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CHD1LQ86WJ1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHD1LQ86WJ1 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHD1LQ86WJ1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHD1LQ86WJ1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHD1LQ86WJ1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CHD1LQ86WJ1 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHD1LQ86WJ1 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC22.1■■□□□ 1.13
CHD1LQ86WJ1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHD1LQ86WJ1 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
CHD1LQ86WJ1 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC22.1■■□□□ 1.13
CHD1LQ86WJ1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC22.1■■□□□ 1.13
CHD1LQ86WJ1 AC112698.1-201ENST00000510299 916 ntBASIC22.1■■□□□ 1.13
CHD1LQ86WJ1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC22.1■■□□□ 1.13
CHD1LQ86WJ1 VENTXP5-201ENST00000523979 775 ntBASIC22.1■■□□□ 1.13
CHD1LQ86WJ1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC22.1■■□□□ 1.13
CHD1LQ86WJ1 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
CHD1LQ86WJ1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC22.1■■□□□ 1.13
CHD1LQ86WJ1 ZNF444P1-201ENST00000559497 298 ntBASIC22.1■■□□□ 1.13
CHD1LQ86WJ1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC22.1■■□□□ 1.13
CHD1LQ86WJ1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC22.1■■□□□ 1.13
CHD1LQ86WJ1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC22.1■■□□□ 1.13
CHD1LQ86WJ1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC22.1■■□□□ 1.13
CHD1LQ86WJ1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHD1LQ86WJ1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC22.1■■□□□ 1.13
CHD1LQ86WJ1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC22.1■■□□□ 1.13
CHD1LQ86WJ1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHD1LQ86WJ1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC22.1■■□□□ 1.13
CHD1LQ86WJ1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
CHD1LQ86WJ1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHD1LQ86WJ1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC22.09■■□□□ 1.13
CHD1LQ86WJ1 HLA-J-201ENST00000462773 1622 ntBASIC22.09■■□□□ 1.13
CHD1LQ86WJ1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
CHD1LQ86WJ1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHD1LQ86WJ1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC22.09■■□□□ 1.13
CHD1LQ86WJ1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC22.09■■□□□ 1.13
CHD1LQ86WJ1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHD1LQ86WJ1 AL138688.1-201ENST00000624851 1594 ntBASIC22.09■■□□□ 1.13
CHD1LQ86WJ1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CHD1LQ86WJ1 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
CHD1LQ86WJ1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms