Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
CACNA1FO60840 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC22.43■■□□□ 1.18
CACNA1FO60840 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
CACNA1FO60840 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
CACNA1FO60840 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC22.43■■□□□ 1.18
CACNA1FO60840 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CACNA1FO60840 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
CACNA1FO60840 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CACNA1FO60840 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CACNA1FO60840 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CACNA1FO60840 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC22.43■■□□□ 1.18
CACNA1FO60840 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CACNA1FO60840 AC145285.3-201ENST00000564603 959 ntBASIC22.43■■□□□ 1.18
CACNA1FO60840 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC22.43■■□□□ 1.18
CACNA1FO60840 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
CACNA1FO60840 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CACNA1FO60840 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CACNA1FO60840 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC22.42■■□□□ 1.18
CACNA1FO60840 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CACNA1FO60840 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
CACNA1FO60840 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
CACNA1FO60840 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
CACNA1FO60840 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CACNA1FO60840 CD9-202ENST00000382515 1229 ntTSL 5 BASIC22.42■■□□□ 1.18
CACNA1FO60840 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CACNA1FO60840 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC22.42■■□□□ 1.18
CACNA1FO60840 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC22.42■■□□□ 1.18
CACNA1FO60840 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC22.42■■□□□ 1.18
CACNA1FO60840 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CACNA1FO60840 HLA-A-201ENST00000376802 1334 ntBASIC22.42■■□□□ 1.18
CACNA1FO60840 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CACNA1FO60840 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CACNA1FO60840 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CACNA1FO60840 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
CACNA1FO60840 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CACNA1FO60840 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC22.42■■□□□ 1.18
CACNA1FO60840 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
CACNA1FO60840 AL049757.1-201ENST00000616842 1596 ntBASIC22.41■■□□□ 1.18
CACNA1FO60840 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CACNA1FO60840 MYCLP1-201ENST00000372451 1075 ntBASIC22.41■■□□□ 1.18
CACNA1FO60840 AC002558.1-201ENST00000488906 803 ntBASIC22.41■■□□□ 1.18
CACNA1FO60840 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC22.41■■□□□ 1.18
CACNA1FO60840 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC22.41■■□□□ 1.18
CACNA1FO60840 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
CACNA1FO60840 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
CACNA1FO60840 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC22.41■■□□□ 1.18
CACNA1FO60840 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC22.41■■□□□ 1.18
CACNA1FO60840 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC22.41■■□□□ 1.18
CACNA1FO60840 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CACNA1FO60840 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CACNA1FO60840 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
CACNA1FO60840 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CACNA1FO60840 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC22.41■■□□□ 1.18
CACNA1FO60840 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
CACNA1FO60840 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CACNA1FO60840 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC22.41■■□□□ 1.18
CACNA1FO60840 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
CACNA1FO60840 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC22.41■■□□□ 1.18
CACNA1FO60840 PENK-208ENST00000523051 772 ntTSL 5 BASIC22.41■■□□□ 1.18
CACNA1FO60840 MTDHP4-201ENST00000600287 670 ntBASIC22.41■■□□□ 1.18
CACNA1FO60840 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC22.41■■□□□ 1.18
CACNA1FO60840 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC22.41■■□□□ 1.18
CACNA1FO60840 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
CACNA1FO60840 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
CACNA1FO60840 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CACNA1FO60840 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC22.4■■□□□ 1.18
CACNA1FO60840 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
CACNA1FO60840 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC22.4■■□□□ 1.18
CACNA1FO60840 DFFB-203ENST00000341385 572 ntTSL 5 BASIC22.4■■□□□ 1.18
CACNA1FO60840 COX5BP2-201ENST00000392354 334 ntBASIC22.4■■□□□ 1.18
CACNA1FO60840 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CACNA1FO60840 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
CACNA1FO60840 AL662844.1-201ENST00000546340 181 ntBASIC22.4■■□□□ 1.18
CACNA1FO60840 VPS51-217ENST00000639871 243 ntTSL 5 BASIC22.4■■□□□ 1.18
CACNA1FO60840 AL356309.3-201ENST00000624132 1934 ntBASIC22.4■■□□□ 1.18
CACNA1FO60840 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC22.4■■□□□ 1.18
CACNA1FO60840 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CACNA1FO60840 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC22.4■■□□□ 1.18
CACNA1FO60840 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CACNA1FO60840 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
CACNA1FO60840 AL138688.1-201ENST00000624851 1594 ntBASIC22.4■■□□□ 1.18
CACNA1FO60840 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CACNA1FO60840 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CACNA1FO60840 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC22.4■■□□□ 1.18
CACNA1FO60840 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
CACNA1FO60840 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CACNA1FO60840 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CACNA1FO60840 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CACNA1FO60840 SRP19-202ENST00000445150 833 ntTSL 2 BASIC22.39■■□□□ 1.18
CACNA1FO60840 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC22.39■■□□□ 1.18
CACNA1FO60840 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC22.39■■□□□ 1.18
CACNA1FO60840 AP001005.1-201ENST00000571755 1248 ntBASIC22.39■■□□□ 1.18
CACNA1FO60840 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC22.39■■□□□ 1.18
CACNA1FO60840 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CACNA1FO60840 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC22.39■■□□□ 1.18
CACNA1FO60840 HLA-J-201ENST00000462773 1622 ntBASIC22.39■■□□□ 1.18
CACNA1FO60840 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC22.39■■□□□ 1.18
CACNA1FO60840 AC132938.5-201ENST00000624980 1813 ntBASIC22.39■■□□□ 1.18
CACNA1FO60840 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.18
CACNA1FO60840 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC22.39■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms