Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SPHK1Q9NYA1 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.27■□□□□ 0.36
SPHK1Q9NYA1 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
SPHK1Q9NYA1 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SPHK1Q9NYA1 AL138831.2-201ENST00000606564 490 ntBASIC17.27■□□□□ 0.36
SPHK1Q9NYA1 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SPHK1Q9NYA1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SPHK1Q9NYA1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.27■□□□□ 0.36
SPHK1Q9NYA1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SPHK1Q9NYA1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SPHK1Q9NYA1 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SPHK1Q9NYA1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.27■□□□□ 0.36
SPHK1Q9NYA1 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SPHK1Q9NYA1 AC125634.1-201ENST00000438758 1403 ntBASIC17.27■□□□□ 0.35
SPHK1Q9NYA1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SPHK1Q9NYA1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SPHK1Q9NYA1 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.27■□□□□ 0.35
SPHK1Q9NYA1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SPHK1Q9NYA1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.27■□□□□ 0.35
SPHK1Q9NYA1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.27■□□□□ 0.35
SPHK1Q9NYA1 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
SPHK1Q9NYA1 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SPHK1Q9NYA1 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SPHK1Q9NYA1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SPHK1Q9NYA1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SPHK1Q9NYA1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SPHK1Q9NYA1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 AL732292.2-201ENST00000609649 430 ntBASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 FLJ13224-201ENST00000313737 1514 ntBASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SPHK1Q9NYA1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 KRT126P-201ENST00000549467 1181 ntBASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SPHK1Q9NYA1 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms