Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC32.11■■■□□ 2.736e-6■■□□□ 11.4
DROSHAQ9NRR4 H2AFX-201ENST00000375167 1373 ntTSL 229.06■■■□□ 2.246e-6■■□□□ 11.4
DROSHAQ9NRR4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.888e-9■■□□□ 11.4
DROSHAQ9NRR4 ARID1A-204ENST00000430799 6521 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.318e-9■■□□□ 11.4
DROSHAQ9NRR4 ARID1A-216ENST00000637465 699 ntTSL 55.92□□□□□ -1.468e-9■■□□□ 11.4
DROSHAQ9NRR4 YWHAE-213ENST00000576854 1374 nt35.19■■■■□ 3.224e-6■■□□□ 11.4
DROSHAQ9NRR4 DDB1-220ENST00000542337 558 ntTSL 331.15■■■□□ 2.585e-11■■□□□ 11.4
DROSHAQ9NRR4 YWHAE-204ENST00000486241 691 ntTSL 222.83■■□□□ 1.254e-6■■□□□ 11.4
DROSHAQ9NRR4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC22.73■■□□□ 1.234e-6■■□□□ 11.4
DROSHAQ9NRR4 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.944e-6■■□□□ 11.4
DROSHAQ9NRR4 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC20.04■□□□□ 0.84e-6■■□□□ 11.4
DROSHAQ9NRR4 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.625e-11■■□□□ 11.4
DROSHAQ9NRR4 DDB1-223ENST00000543658 571 ntTSL 418.07■□□□□ 0.485e-11■■□□□ 11.4
DROSHAQ9NRR4 YWHAE-205ENST00000489287 465 ntTSL 217.4■□□□□ 0.384e-6■■□□□ 11.4
DROSHAQ9NRR4 DDB1-214ENST00000539426 805 ntTSL 317.22■□□□□ 0.355e-11■■□□□ 11.4
DROSHAQ9NRR4 YWHAE-211ENST00000573196 739 ntTSL 216.85■□□□□ 0.294e-6■■□□□ 11.4
DROSHAQ9NRR4 DDB1-222ENST00000543627 540 ntTSL 516.69■□□□□ 0.265e-11■■□□□ 11.4
DROSHAQ9NRR4 DDB1-221ENST00000543162 575 ntTSL 416.21■□□□□ 0.195e-11■■□□□ 11.4
DROSHAQ9NRR4 ATF2-207ENST00000409833 1335 ntTSL 1 (best) BASIC16.15■□□□□ 0.185e-11■■□□□ 11.4
DROSHAQ9NRR4 YWHAE-210ENST00000573026 780 ntTSL 3 BASIC15.88■□□□□ 0.134e-6■■□□□ 11.4
DROSHAQ9NRR4 ATF2-216ENST00000435231 784 ntTSL 515.87■□□□□ 0.135e-11■■□□□ 11.4
DROSHAQ9NRR4 ATF2-208ENST00000413123 681 ntTSL 515.78■□□□□ 0.125e-11■■□□□ 11.4
DROSHAQ9NRR4 YWHAE-207ENST00000498643 312 ntTSL 315.51■□□□□ 0.074e-6■■□□□ 11.4
DROSHAQ9NRR4 ATF2-210ENST00000417080 2113 ntTSL 1 (best)15.27■□□□□ 0.045e-11■■□□□ 11.4
DROSHAQ9NRR4 ATF2-218ENST00000445349 483 ntTSL 414.74□□□□□ -0.055e-11■■□□□ 11.4
DROSHAQ9NRR4 YWHAE-203ENST00000469398 676 ntTSL 213.68□□□□□ -0.224e-6■■□□□ 11.4
DROSHAQ9NRR4 ATF2-206ENST00000409635 2109 ntTSL 5 BASIC13.54□□□□□ -0.245e-11■■□□□ 11.4
DROSHAQ9NRR4 DDB1-208ENST00000537120 1215 ntTSL 212.88□□□□□ -0.355e-11■■□□□ 11.4
DROSHAQ9NRR4 ATF2-219ENST00000456655 1861 ntTSL 1 (best)12.82□□□□□ -0.365e-11■■□□□ 11.4
DROSHAQ9NRR4 ATF2-209ENST00000415955 1896 ntTSL 1 (best)12.05□□□□□ -0.485e-11■■□□□ 11.4
DROSHAQ9NRR4 ATF2-213ENST00000428760 1989 ntTSL 1 (best)11.69□□□□□ -0.545e-11■■□□□ 11.4
DROSHAQ9NRR4 DDB1-217ENST00000540166 3906 ntTSL 211.61□□□□□ -0.555e-11■■□□□ 11.4
DROSHAQ9NRR4 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC11.59□□□□□ -0.555e-11■■□□□ 11.4
DROSHAQ9NRR4 ATF2-211ENST00000421438 1966 ntTSL 1 (best)11.26□□□□□ -0.615e-11■■□□□ 11.4
DROSHAQ9NRR4 ATF2-214ENST00000429579 2081 ntTSL 1 (best)10.93□□□□□ -0.665e-11■■□□□ 11.4
DROSHAQ9NRR4 ATF2-217ENST00000437522 883 ntTSL 510.66□□□□□ -0.75e-11■■□□□ 11.4
DROSHAQ9NRR4 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC10.13□□□□□ -0.795e-11■■□□□ 11.4
DROSHAQ9NRR4 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC7.61□□□□□ -1.195e-11■■□□□ 11.4
DROSHAQ9NRR4 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.195e-11■■□□□ 11.4
DROSHAQ9NRR4 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC7.4□□□□□ -1.225e-11■■□□□ 11.4
DROSHAQ9NRR4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.122e-6■■□□□ 11.4
DROSHAQ9NRR4 COPB1-206ENST00000529210 607 ntTSL 418.66■□□□□ 0.583e-9■■□□□ 11.4
DROSHAQ9NRR4 COPB1-207ENST00000529866 729 ntTSL 216.86■□□□□ 0.293e-9■■□□□ 11.4
DROSHAQ9NRR4 COPB1-201ENST00000249923 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.063e-9■■□□□ 11.4
DROSHAQ9NRR4 COPB1-211ENST00000534234 1584 ntTSL 513.82□□□□□ -0.23e-9■■□□□ 11.4
DROSHAQ9NRR4 COPB1-210ENST00000533533 537 ntTSL 413.76□□□□□ -0.213e-9■■□□□ 11.4
DROSHAQ9NRR4 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.493e-9■■□□□ 11.4
DROSHAQ9NRR4 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.393e-9■■□□□ 11.4
DROSHAQ9NRR4 COPB1-212ENST00000534771 576 ntTSL 4-0.58□□□□□ -2.53e-9■■□□□ 11.4
DROSHAQ9NRR4 AMFR-211ENST00000568657 539 ntTSL 434.85■■■■□ 3.171e-7■■□□□ 11.4
DROSHAQ9NRR4 AMFR-206ENST00000565445 803 ntTSL 533.27■■■□□ 2.921e-7■■□□□ 11.4
DROSHAQ9NRR4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.141e-7■■□□□ 11.4
DROSHAQ9NRR4 AMFR-204ENST00000563664 567 ntTSL 415.22■□□□□ 0.031e-7■■□□□ 11.4
DROSHAQ9NRR4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.526e-7■■□□□ 11.4
DROSHAQ9NRR4 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.746e-7■■□□□ 11.4
DROSHAQ9NRR4 MVD-208ENST00000563785 888 ntTSL 228.89■■■□□ 2.221e-6■■□□□ 11.4
DROSHAQ9NRR4 MVD-214ENST00000567064 758 ntTSL 328.65■■■□□ 2.181e-6■■□□□ 11.4
DROSHAQ9NRR4 MVD-217ENST00000569177 870 ntTSL 526.15■■□□□ 1.781e-6■■□□□ 11.4
DROSHAQ9NRR4 MVD-206ENST00000563170 904 ntTSL 325.39■■□□□ 1.651e-6■■□□□ 11.4
DROSHAQ9NRR4 MVD-215ENST00000568133 853 ntTSL 325.25■■□□□ 1.631e-6■■□□□ 11.4
DROSHAQ9NRR4 TIAL1-201ENST00000369086 490 ntTSL 22.76□□□□□ -1.971e-11■■□□□ 11.4
DROSHAQ9NRR4 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.524e-21■■□□□ 11.4
DROSHAQ9NRR4 SNORD48-201ENST00000364953 64 ntBASIC2.67□□□□□ -1.984e-21■■□□□ 11.4
DROSHAQ9NRR4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.463e-22■■□□□ 11.4
DROSHAQ9NRR4 SNORD91B-202ENST00000608459 222 ntBASIC6.69□□□□□ -1.343e-22■■□□□ 11.4
DROSHAQ9NRR4 TSR1-203ENST00000575049 387 ntTSL 35.59□□□□□ -1.513e-22■■□□□ 11.4
DROSHAQ9NRR4 SNORD91B-201ENST00000391250 95 nt0.59□□□□□ -2.313e-22■■□□□ 11.4
DROSHAQ9NRR4 DDX3X-206ENST00000542215 1592 ntTSL 228.46■■■□□ 2.152e-8■■□□□ 11.4
DROSHAQ9NRR4 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.112e-8■■□□□ 11.4
DROSHAQ9NRR4 DDX3X-216ENST00000626301 3013 ntTSL 5 BASIC15.43■□□□□ 0.062e-8■■□□□ 11.4
DROSHAQ9NRR4 DDX3X-215ENST00000625837 3237 ntTSL 5 BASIC14.89□□□□□ -0.032e-8■■□□□ 11.4
DROSHAQ9NRR4 DDX3X-219ENST00000630255 3289 ntTSL 514.17□□□□□ -0.142e-8■■□□□ 11.4
DROSHAQ9NRR4 DDX3X-204ENST00000478993 3397 ntTSL 1 (best)13.99□□□□□ -0.172e-8■■□□□ 11.4
DROSHAQ9NRR4 DDX3X-220ENST00000630370 3120 ntTSL 513.7□□□□□ -0.222e-8■■□□□ 11.4
DROSHAQ9NRR4 DDX3X-218ENST00000629785 3457 ntTSL 513.54□□□□□ -0.242e-8■■□□□ 11.4
DROSHAQ9NRR4 DDX3X-221ENST00000630858 3181 ntTSL 513.23□□□□□ -0.292e-8■■□□□ 11.4
DROSHAQ9NRR4 DDX3X-203ENST00000457138 5346 ntTSL 2 BASIC13.07□□□□□ -0.322e-8■■□□□ 11.4
DROSHAQ9NRR4 DDX3X-222ENST00000631641 583 ntTSL 312.87□□□□□ -0.352e-8■■□□□ 11.4
DROSHAQ9NRR4 DDX3X-202ENST00000441189 1051 ntTSL 2 BASIC12.87□□□□□ -0.352e-8■■□□□ 11.4
DROSHAQ9NRR4 DDX3X-211ENST00000615742 485 ntTSL 412.87□□□□□ -0.352e-8■■□□□ 11.4
DROSHAQ9NRR4 DDX3X-217ENST00000629496 5023 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.412e-8■■□□□ 11.4
DROSHAQ9NRR4 DDX3X-205ENST00000480592 1001 ntTSL 1 (best)12.23□□□□□ -0.452e-8■■□□□ 11.4
DROSHAQ9NRR4 DDX3X-207ENST00000610559 542 ntTSL 411.72□□□□□ -0.532e-8■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-250ENST00000637536 562 ntTSL 434.3■■■■□ 3.081e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-219ENST00000636033 1940 ntTSL 532■■■□□ 2.711e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-266ENST00000637946 913 ntTSL 528.61■■■□□ 2.171e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC28.03■■■□□ 2.081e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC27.09■■□□□ 1.931e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-209ENST00000520051 667 ntTSL 527.09■■□□□ 1.931e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-216ENST00000635944 1960 ntTSL 526.91■■□□□ 1.91e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-239ENST00000636920 1989 ntTSL 526.47■■□□□ 1.831e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-215ENST00000635769 575 ntTSL 425.63■■□□□ 1.691e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-244ENST00000637202 1634 ntTSL 525.61■■□□□ 1.691e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-252ENST00000637603 579 ntTSL 425.53■■□□□ 1.681e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-205ENST00000518087 918 ntTSL 525.4■■□□□ 1.661e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-217ENST00000635998 1845 ntTSL 525.37■■□□□ 1.651e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC25.26■■□□□ 1.631e-12■■□□□ 11.4
DROSHAQ9NRR4 JMJD1C-211ENST00000633035 499 ntTSL 325.25■■□□□ 1.631e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-236ENST00000636815 1724 ntTSL 525.15■■□□□ 1.621e-12■■□□□ 11.4
DROSHAQ9NRR4 ASAH1-212ENST00000523593 586 ntTSL 524.94■■□□□ 1.581e-12■■□□□ 11.4
Retrieved 100 of 16,331 protein–RNA pairs in 82.5 ms