RNA–Protein interactions for RNA: ENST00000415955.5

ATF2-209, Transcript of activating transcription factor 2, humanhuman

TSL 1 (best)

Gene ATF2, Length 1,896 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF2-209ENST00000415955 NISCHQ9Y2I1 1504 aa16.73■□□□□ 0.27
ATF2-209ENST00000415955 CCDC180Q9P1Z9 1646 aa14.59□□□□□ -0.07
ATF2-209ENST00000415955 HRCP23327 699 aa14.33□□□□□ -0.12
ATF2-209ENST00000415955 SHROOM4Q9ULL8 1493 aa14.27□□□□□ -0.12
ATF2-209ENST00000415955 ABCC9O60706 1549 aa14.25□□□□□ -0.13
ATF2-209ENST00000415955 ZCCHC6Q5VYS8 1495 aaKnown RBP14.24□□□□□ -0.13
ATF2-209ENST00000415955 SUPT5HO00267 1087 aaKnown RBP14.22□□□□□ -0.13
ATF2-209ENST00000415955 CHIC1Q5VXU3 224 aa14.12□□□□□ -0.15
ATF2-209ENST00000415955 MYO15BQ96JP2 1530 aa14.08□□□□□ -0.16
ATF2-209ENST00000415955 DCAF1Q9Y4B6 1507 aa14□□□□□ -0.17
ATF2-209ENST00000415955 PCGF6Q9BYE7 350 aa13.95□□□□□ -0.18
ATF2-209ENST00000415955 PPARGC1BQ86YN6 1023 aaKnown RBP13.78□□□□□ -0.2
ATF2-209ENST00000415955 TRIM26Q12899 539 aaPredicted RBP13.75□□□□□ -0.21
ATF2-209ENST00000415955 PELP1Q8IZL8 1130 aaKnown RBP13.74□□□□□ -0.21
ATF2-209ENST00000415955 DCAF8L2P0C7V8 631 aa13.71□□□□□ -0.21
ATF2-209ENST00000415955 ZEB1P37275 1124 aaPredicted RBP13.7□□□□□ -0.22
ATF2-209ENST00000415955 RB1CC1Q8TDY2 1594 aa13.63□□□□□ -0.23
ATF2-209ENST00000415955 NACADO15069 1562 aa13.62□□□□□ -0.23
ATF2-209ENST00000415955 LOC105371045A0A1W2PR82 267 aa13.61□□□□□ -0.23
ATF2-209ENST00000415955 UNC13AQ9UPW8 1703 aa13.48□□□□□ -0.25
ATF2-209ENST00000415955 SCRIBQ14160 1630 aa13.4□□□□□ -0.26
ATF2-209ENST00000415955 RSF1Q96T23 1441 aaPredicted RBP13.36□□□□□ -0.27
ATF2-209ENST00000415955 SCAF1Q9H7N4 1312 aaKnown RBP13.36□□□□□ -0.27
ATF2-209ENST00000415955 TRIM41Q8WV44 630 aa13.31□□□□□ -0.28
ATF2-209ENST00000415955 BICRAQ9NZM4 1560 aa13.28□□□□□ -0.28
ATF2-209ENST00000415955 PABPN1Q86U42 306 aaKnown RBP eCLIP13.28□□□□□ -0.28
ATF2-209ENST00000415955 MYT1Q01538 1121 aa13.24□□□□□ -0.29
ATF2-209ENST00000415955 ACIN1Q9UKV3 1341 aaKnown RBP13.17□□□□□ -0.3
ATF2-209ENST00000415955 DNAJC5BQ9UF47 199 aa13.16□□□□□ -0.3
ATF2-209ENST00000415955 CENPBP07199 599 aaPredicted RBP13.07□□□□□ -0.32
ATF2-209ENST00000415955 FAM9AQ8IZU1 332 aaPredicted RBP13.06□□□□□ -0.32
ATF2-209ENST00000415955 NEUROD1Q13562 356 aa13.05□□□□□ -0.32
ATF2-209ENST00000415955 WRNQ14191 1432 aaPredicted RBP eCLIP13.04□□□□□ -0.32
ATF2-209ENST00000415955 CCER1Q8TC90 406 aaPredicted RBP13.02□□□□□ -0.32
ATF2-209ENST00000415955 DIEXFQ68CQ4 756 aaKnown RBP13□□□□□ -0.33
ATF2-209ENST00000415955 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.97□□□□□ -0.33
ATF2-209ENST00000415955 MROH2BQ7Z745 1585 aa12.96□□□□□ -0.34
ATF2-209ENST00000415955 GTF3C3Q9Y5Q9 886 aa12.95□□□□□ -0.34
ATF2-209ENST00000415955 EIF4G1Q04637 1599 aaKnown RBP12.95□□□□□ -0.34
ATF2-209ENST00000415955 CECR2Q9BXF3 1484 aa12.94□□□□□ -0.34
ATF2-209ENST00000415955 BAZ1AQ9NRL2 1556 aaPredicted RBP12.91□□□□□ -0.34
ATF2-209ENST00000415955 CC2D2AQ9P2K1 1620 aa12.89□□□□□ -0.35
ATF2-209ENST00000415955 TNIKQ9UKE5 1360 aa12.86□□□□□ -0.35
ATF2-209ENST00000415955 WIZO95785 1651 aa12.85□□□□□ -0.35
ATF2-209ENST00000415955 ZNF316A6NFI3 1004 aaPredicted RBP12.85□□□□□ -0.35
ATF2-209ENST00000415955 EEA1Q15075 1411 aa12.85□□□□□ -0.35
ATF2-209ENST00000415955 CEP162Q5TB80 1403 aa12.83□□□□□ -0.36
ATF2-209ENST00000415955 EHMT2Q96KQ7 1210 aa12.82□□□□□ -0.36
ATF2-209ENST00000415955 SMARCA4P51532 1647 aa12.79□□□□□ -0.36
ATF2-209ENST00000415955 TOP2AP11388 1531 aaKnown RBP12.77□□□□□ -0.37
ATF2-209ENST00000415955 CCDC88BA6NC98 1476 aa12.75□□□□□ -0.37
ATF2-209ENST00000415955 CLSPNQ9HAW4 1339 aa12.72□□□□□ -0.37
ATF2-209ENST00000415955 CSRNP3Q8WYN3 585 aa12.7□□□□□ -0.38
ATF2-209ENST00000415955 GOLGA3Q08378 1498 aa12.68□□□□□ -0.38
ATF2-209ENST00000415955 SMARCA2P51531 1590 aa12.68□□□□□ -0.38
ATF2-209ENST00000415955 SOGA1O94964 1423 aa12.67□□□□□ -0.38
ATF2-209ENST00000415955 ABCC8Q09428 1581 aa12.67□□□□□ -0.38
ATF2-209ENST00000415955 MIER1Q8N108 512 aa12.64□□□□□ -0.39
ATF2-209ENST00000415955 ATAD2BQ9ULI0 1458 aa12.63□□□□□ -0.39
ATF2-209ENST00000415955 PEG3Q9GZU2 1588 aa12.61□□□□□ -0.39
ATF2-209ENST00000415955 CEP164Q9UPV0 1460 aa12.59□□□□□ -0.39
ATF2-209ENST00000415955 UBTFP17480 764 aaKnown RBP12.59□□□□□ -0.39
ATF2-209ENST00000415955 KIF21BO75037 1637 aa12.58□□□□□ -0.4
ATF2-209ENST00000415955 NCAPD3P42695 1498 aa12.56□□□□□ -0.4
ATF2-209ENST00000415955 RUSC2Q8N2Y8 1516 aa12.56□□□□□ -0.4
ATF2-209ENST00000415955 BAZ1BQ9UIG0 1483 aaKnown RBP12.56□□□□□ -0.4
ATF2-209ENST00000415955 HMGXB3Q12766 1538 aa12.55□□□□□ -0.4
ATF2-209ENST00000415955 YTHDC1Q96MU7 727 aaKnown RBP12.55□□□□□ -0.4
ATF2-209ENST00000415955 VPS8Q8N3P4 1428 aa12.55□□□□□ -0.4
ATF2-209ENST00000415955 TTBK1Q5TCY1 1321 aaPredicted RBP12.53□□□□□ -0.4
ATF2-209ENST00000415955 CLIP1P30622 1438 aa12.52□□□□□ -0.4
ATF2-209ENST00000415955 HNRNPUL2Q1KMD3 747 aaKnown RBP12.48□□□□□ -0.41
ATF2-209ENST00000415955 APLP2Q06481 763 aa12.44□□□□□ -0.42
ATF2-209ENST00000415955 SUPT16HQ9Y5B9 1047 aaKnown RBP12.44□□□□□ -0.42
ATF2-209ENST00000415955 DHX57Q6P158 1386 aaKnown RBP12.43□□□□□ -0.42
ATF2-209ENST00000415955 SYNJ1O43426 1573 aa12.4□□□□□ -0.42
ATF2-209ENST00000415955 CUX2O14529 1486 aa12.4□□□□□ -0.42
ATF2-209ENST00000415955 RAPGEF2Q9Y4G8 1499 aa12.37□□□□□ -0.43
ATF2-209ENST00000415955 RRBP1Q9P2E9 1410 aaKnown RBP12.36□□□□□ -0.43
ATF2-209ENST00000415955 ERICH3Q5RHP9 1530 aa12.35□□□□□ -0.43
ATF2-209ENST00000415955 TSHZ2Q9NRE2 1034 aa12.34□□□□□ -0.43
ATF2-209ENST00000415955 NESP48681 1621 aa12.33□□□□□ -0.44
ATF2-209ENST00000415955 ANP32EQ9BTT0 268 aa12.33□□□□□ -0.44
ATF2-209ENST00000415955 PRXQ9BXM0 1461 aa12.3□□□□□ -0.44
ATF2-209ENST00000415955 TOP2BQ02880 1626 aa12.29□□□□□ -0.44
ATF2-209ENST00000415955 ERCC6Q03468 1493 aa12.27□□□□□ -0.44
ATF2-209ENST00000415955 ARAP1Q96P48 1450 aa12.27□□□□□ -0.44
ATF2-209ENST00000415955 LAMC3Q9Y6N6 1575 aa12.24□□□□□ -0.45
ATF2-209ENST00000415955 BIVM-ERCC5R4GMW8 1640 aa12.23□□□□□ -0.45
ATF2-209ENST00000415955 CCNB3Q8WWL7 1395 aa12.23□□□□□ -0.45
ATF2-209ENST00000415955 KIF21AQ7Z4S6 1674 aa12.23□□□□□ -0.45
ATF2-209ENST00000415955 PRDM2Q13029 1718 aa12.21□□□□□ -0.45
ATF2-209ENST00000415955 CADPSQ9ULU8 1353 aa12.21□□□□□ -0.46
ATF2-209ENST00000415955 TIMELESSQ9UNS1 1208 aa12.21□□□□□ -0.46
ATF2-209ENST00000415955 MAP3K1Q13233 1512 aa12.2□□□□□ -0.46
ATF2-209ENST00000415955 KANK4Q5T7N3 995 aaPredicted RBP12.2□□□□□ -0.46
ATF2-209ENST00000415955 CFTRP13569 1480 aa12.19□□□□□ -0.46
ATF2-209ENST00000415955 MAPKBP1O60336 1514 aa12.16□□□□□ -0.46
ATF2-209ENST00000415955 CCER2I3L3R5 266 aa12.14□□□□□ -0.47
ATF2-209ENST00000415955 THOC2Q8NI27 1593 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms