Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
SMIM11BQ8TCY0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 TSPY26P-202ENST00000565928 3884 ntBASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 NME6-213ENST00000451657 871 ntTSL 2 BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 KRT8P11-201ENST00000409686 1436 ntBASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 AC093010.1-201ENST00000473625 1624 ntBASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 AC063926.3-201ENST00000624734 5658 ntBASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
SMIM11BQ8TCY0 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
SMIM11BQ8TCY0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms