Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SRFBP1Q8NEF9 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRFBP1Q8NEF9 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SRFBP1Q8NEF9 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
SRFBP1Q8NEF9 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.14■□□□□ 0.33
SRFBP1Q8NEF9 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.14■□□□□ 0.33
SRFBP1Q8NEF9 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
SRFBP1Q8NEF9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.14■□□□□ 0.33
SRFBP1Q8NEF9 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.14■□□□□ 0.33
SRFBP1Q8NEF9 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.14■□□□□ 0.33
SRFBP1Q8NEF9 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
SRFBP1Q8NEF9 AL390719.2-201ENST00000606993 987 ntBASIC17.14■□□□□ 0.33
SRFBP1Q8NEF9 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.14■□□□□ 0.33
SRFBP1Q8NEF9 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SRFBP1Q8NEF9 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRFBP1Q8NEF9 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRFBP1Q8NEF9 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRFBP1Q8NEF9 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SRFBP1Q8NEF9 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SRFBP1Q8NEF9 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SRFBP1Q8NEF9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.14■□□□□ 0.33
SRFBP1Q8NEF9 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 SPDYE13P-201ENST00000445314 798 ntBASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 AC087388.1-201ENST00000571370 1112 ntBASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 Z83836.1-201ENST00000624605 1642 ntBASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SRFBP1Q8NEF9 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRFBP1Q8NEF9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SRFBP1Q8NEF9 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.12■□□□□ 0.33
SRFBP1Q8NEF9 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
SRFBP1Q8NEF9 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SRFBP1Q8NEF9 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
SRFBP1Q8NEF9 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRFBP1Q8NEF9 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.12■□□□□ 0.33
SRFBP1Q8NEF9 GUSBP12-201ENST00000513727 720 ntBASIC17.12■□□□□ 0.33
SRFBP1Q8NEF9 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.12■□□□□ 0.33
SRFBP1Q8NEF9 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.12■□□□□ 0.33
SRFBP1Q8NEF9 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.12■□□□□ 0.33
SRFBP1Q8NEF9 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRFBP1Q8NEF9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SRFBP1Q8NEF9 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRFBP1Q8NEF9 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRFBP1Q8NEF9 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.12■□□□□ 0.33
SRFBP1Q8NEF9 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRFBP1Q8NEF9 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRFBP1Q8NEF9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SRFBP1Q8NEF9 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRFBP1Q8NEF9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SRFBP1Q8NEF9 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRFBP1Q8NEF9 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRFBP1Q8NEF9 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SRFBP1Q8NEF9 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms