Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.25■□□□□ 0.03
RAI1Q7Z5J4 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.25■□□□□ 0.03
RAI1Q7Z5J4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.25■□□□□ 0.03
RAI1Q7Z5J4 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.25■□□□□ 0.03
RAI1Q7Z5J4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAI1Q7Z5J4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RAI1Q7Z5J4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.25■□□□□ 0.03
RAI1Q7Z5J4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAI1Q7Z5J4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RAI1Q7Z5J4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 HLA-J-201ENST00000462773 1622 ntBASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 AC093010.1-201ENST00000473625 1624 ntBASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 RPSAP43-201ENST00000402237 625 ntBASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 AC004832.2-201ENST00000426397 482 ntBASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 NKAPP1-205ENST00000585790 367 ntBASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 AC135776.1-201ENST00000319817 2481 ntBASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 AC104109.2-201ENST00000602919 1418 ntBASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.24■□□□□ 0.03
RAI1Q7Z5J4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 UPF3AP3-201ENST00000420996 769 ntBASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 AL356488.2-201ENST00000602755 427 ntBASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 HMGN1P19-201ENST00000436976 333 ntBASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RAI1Q7Z5J4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.22■□□□□ 0.03
RAI1Q7Z5J4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms