Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H2BDP58876 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC13.53□□□□□ -0.24
HIST1H2BDP58876 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC13.53□□□□□ -0.24
HIST1H2BDP58876 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H2BDP58876 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.53□□□□□ -0.24
HIST1H2BDP58876 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H2BDP58876 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H2BDP58876 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
HIST1H2BDP58876 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H2BDP58876 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
HIST1H2BDP58876 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H2BDP58876 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H2BDP58876 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H2BDP58876 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H2BDP58876 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
HIST1H2BDP58876 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H2BDP58876 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST1H2BDP58876 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
HIST1H2BDP58876 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HIST1H2BDP58876 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HIST1H2BDP58876 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.52□□□□□ -0.24
HIST1H2BDP58876 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
HIST1H2BDP58876 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.52□□□□□ -0.24
HIST1H2BDP58876 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
HIST1H2BDP58876 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 IGHV3-19-201ENST00000521488 291 ntBASIC13.52□□□□□ -0.25
HIST1H2BDP58876 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 AL355001.2-201ENST00000620617 1191 ntBASIC13.52□□□□□ -0.25
HIST1H2BDP58876 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 GMCL1P1-201ENST00000463439 1581 ntBASIC13.52□□□□□ -0.25
HIST1H2BDP58876 MYLKP1-201ENST00000509077 1580 ntBASIC13.52□□□□□ -0.25
HIST1H2BDP58876 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST1H2BDP58876 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 ATP5G2P3-201ENST00000429083 425 ntBASIC13.51□□□□□ -0.25
HIST1H2BDP58876 TSPY21P-201ENST00000433481 731 ntBASIC13.51□□□□□ -0.25
HIST1H2BDP58876 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
HIST1H2BDP58876 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.5□□□□□ -0.25
HIST1H2BDP58876 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
HIST1H2BDP58876 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.5□□□□□ -0.25
HIST1H2BDP58876 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.5□□□□□ -0.25
HIST1H2BDP58876 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms