Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 HMGN2P8-201ENST00000391458 268 ntBASIC3.78□□□□□ -1.81e-11■■■□□ 17.3
RPS3P23396 SLC16A3-205ENST00000578574 958 ntTSL 223.03■■□□□ 1.287e-27■■■□□ 17.3
RPS3P23396 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC6.93□□□□□ -1.36e-7■■■□□ 17.3
RPS3P23396 SNRNP70-203ENST00000544278 3221 ntTSL 1 (best)15.3■□□□□ 0.044e-7■■■□□ 17.3
RPS3P23396 SLC38A2-202ENST00000546520 601 ntTSL 24.77□□□□□ -1.651e-23■■■□□ 17.3
RPS3P23396 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.217e-7■■■□□ 17.3
RPS3P23396 TMEM101-205ENST00000589334 1830 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.357e-7■■■□□ 17.3
RPS3P23396 MCM7-209ENST00000485286 2900 ntTSL 217.34■□□□□ 0.372e-7■■■□□ 17.3
RPS3P23396 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.43■□□□□ 0.222e-7■■■□□ 17.3
RPS3P23396 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.161e-6■■■□□ 17.2
RPS3P23396 OCLN-201ENST00000355237 6438 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.671e-6■■■□□ 17.2
RPS3P23396 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.7□□□□□ -0.062e-6■■■□□ 17.2
RPS3P23396 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.062e-6■■■□□ 17.2
RPS3P23396 ABCC1-204ENST00000572882 4565 ntTSL 1 (best)9.6□□□□□ -0.872e-6■■■□□ 17.2
RPS3P23396 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.168e-11■■■□□ 17.2
RPS3P23396 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.098e-11■■■□□ 17.2
RPS3P23396 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.418e-11■■■□□ 17.2
RPS3P23396 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.418e-11■■■□□ 17.2
RPS3P23396 HNRNPF-203ENST00000357065 2617 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.678e-11■■■□□ 17.2
RPS3P23396 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.376e-8■■■□□ 17.2
RPS3P23396 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.236e-8■■■□□ 17.2
RPS3P23396 SELENOH-203ENST00000533321 1454 ntTSL 1 (best)16.15■□□□□ 0.186e-8■■■□□ 17.2
RPS3P23396 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.086e-8■■■□□ 17.2
RPS3P23396 SELENOH-202ENST00000528798 469 ntTSL 215.11■□□□□ 0.016e-8■■■□□ 17.2
RPS3P23396 PCYOX1-202ENST00000414812 957 ntTSL 311.14□□□□□ -0.638e-7■■■□□ 17.2
RPS3P23396 NET1-203ENST00000449083 637 ntTSL 516■□□□□ 0.159e-9■■■□□ 17.2
RPS3P23396 NET1-206ENST00000486354 599 ntTSL 316■□□□□ 0.159e-9■■■□□ 17.2
RPS3P23396 SLC3A2-207ENST00000535768 597 ntTSL 59.67□□□□□ -0.862e-23■■■□□ 17.2
RPS3P23396 ARL2-205ENST00000531533 281 ntTSL 212.85□□□□□ -0.356e-10■■■□□ 17.2
RPS3P23396 ARL2-202ENST00000524585 1228 ntTSL 212.67□□□□□ -0.386e-10■■■□□ 17.2
RPS3P23396 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.598e-8■■■□□ 17.2
RPS3P23396 NPC2-206ENST00000555592 469 ntTSL 517.06■□□□□ 0.321e-6■■■□□ 17.2
RPS3P23396 TMEM123-206ENST00000529492 549 ntTSL 21.92□□□□□ -2.16e-8■■■□□ 17.2
RPS3P23396 SYVN1-209ENST00000527765 516 ntTSL 312.47□□□□□ -0.411e-8■■■□□ 17.2
RPS3P23396 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.74□□□□□ -0.052e-7■■■□□ 17.2
RPS3P23396 HNRNPL-203ENST00000595164 2404 ntTSL 212.8□□□□□ -0.364e-8■■■□□ 17.2
RPS3P23396 HNRNPL-206ENST00000597731 3094 ntTSL 210.23□□□□□ -0.774e-8■■■□□ 17.2
RPS3P23396 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC12.86□□□□□ -0.357e-7■■■□□ 17.2
RPS3P23396 ERP29-201ENST00000261735 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.547e-7■■■□□ 17.2
RPS3P23396 MXRA8-205ENST00000464351 405 ntTSL 219.1■□□□□ 0.657e-8■■■□□ 17.2
RPS3P23396 CCT8-210ENST00000496121 1326 ntTSL 28.29□□□□□ -1.084e-12■■■□□ 17.2
RPS3P23396 ARPC3-201ENST00000228825 1014 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.826e-15■■■□□ 17.2
RPS3P23396 ARPC3-203ENST00000467622 1098 ntTSL 58.84□□□□□ -0.992e-6■■■□□ 17.2
RPS3P23396 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.19□□□□□ -1.582e-6■■■□□ 17.2
RPS3P23396 VPS28-206ENST00000526734 570 ntTSL 220.03■□□□□ 0.86e-10■■■□□ 17.2
RPS3P23396 VPS28-215ENST00000531924 695 ntTSL 314.12□□□□□ -0.156e-10■■■□□ 17.2
RPS3P23396 RBMX-210ENST00000565907 563 ntTSL 214.02□□□□□ -0.176e-10■■■□□ 17.2
RPS3P23396 PLEKHB2-209ENST00000482225 644 ntTSL 213.25□□□□□ -0.296e-10■■■□□ 17.2
RPS3P23396 VPS28-211ENST00000530790 561 ntTSL 212.87□□□□□ -0.356e-10■■■□□ 17.2
RPS3P23396 RBMX-208ENST00000563370 577 ntTSL 311.87□□□□□ -0.516e-10■■■□□ 17.2
RPS3P23396 RBMX-211ENST00000567262 477 ntTSL 511.87□□□□□ -0.516e-10■■■□□ 17.2
RPS3P23396 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.33■■□□□ 1.011e-7■■■□□ 17.2
RPS3P23396 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.51e-7■■■□□ 17.2
RPS3P23396 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.11e-7■■■□□ 17.2
RPS3P23396 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.11e-7■■■□□ 17.2
RPS3P23396 LMAN2-206ENST00000513877 823 ntTSL 216.84■□□□□ 0.293e-7■■■□□ 17.2
RPS3P23396 ATP5J2-212ENST00000524321 584 ntTSL 210.66□□□□□ -0.73e-13■■■□□ 17.2
RPS3P23396 ATP5J2-208ENST00000485011 597 ntTSL 210.6□□□□□ -0.713e-13■■■□□ 17.2
RPS3P23396 PKM-224ENST00000569857 1355 ntTSL 512.15□□□□□ -0.466e-15■■■□□ 17.2
RPS3P23396 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.641e-7■■■□□ 17.2
RPS3P23396 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.351e-7■■■□□ 17.2
RPS3P23396 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.091e-7■■■□□ 17.2
RPS3P23396 CNP-210ENST00000592105 572 ntTSL 417.87■□□□□ 0.457e-10■■■□□ 17.2
RPS3P23396 TSPAN3-204ENST00000558394 550 ntTSL 416.73■□□□□ 0.274e-7■■■□□ 17.2
RPS3P23396 C10orf10-203ENST00000496638 868 ntTSL 321.22■□□□□ 0.994e-7■■■□□ 17.2
RPS3P23396 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.234e-7■■■□□ 17.2
RPS3P23396 TRIM28-207ENST00000597136 1552 ntTSL 214.71□□□□□ -0.052e-9■■■□□ 17.2
RPS3P23396 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.95e-9■■■□□ 17.2
RPS3P23396 GATA1-201ENST00000376665 1140 ntTSL 5 BASIC11.77□□□□□ -0.535e-9■■■□□ 17.2
RPS3P23396 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.85■□□□□ 0.932e-9■■■□□ 17.2
RPS3P23396 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.72e-9■■■□□ 17.2
RPS3P23396 MCM7-207ENST00000465738 448 ntTSL 29.18□□□□□ -0.947e-10■■■□□ 17.1
RPS3P23396 CYB5R3-206ENST00000438270 675 ntTSL 312.23□□□□□ -0.451e-7■■■□□ 17.1
RPS3P23396 RPS13-203ENST00000525828 664 ntTSL 216.51■□□□□ 0.239e-8■■■□□ 17.1
RPS3P23396 RPS13-204ENST00000526895 561 ntTSL 313.93□□□□□ -0.189e-8■■■□□ 17.1
RPS3P23396 RPS13-209ENST00000533969 355 ntTSL 313.24□□□□□ -0.291e-7■■■□□ 17.1
RPS3P23396 RPS13-201ENST00000228140 491 ntTSL 2 BASIC10.1□□□□□ -0.799e-8■■■□□ 17.1
RPS3P23396 RPS13-202ENST00000525634 646 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.999e-8■■■□□ 17.1
RPS3P23396 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.184e-7■■■□□ 17.1
RPS3P23396 CANT1-214ENST00000592228 1546 ntTSL 514.41□□□□□ -0.14e-7■■■□□ 17.1
RPS3P23396 CANT1-201ENST00000302345 3534 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.524e-7■■■□□ 17.1
RPS3P23396 CANT1-207ENST00000588611 900 ntTSL 311.67□□□□□ -0.544e-7■■■□□ 17.1
RPS3P23396 CANT1-216ENST00000620915 3337 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.614e-7■■■□□ 17.1
RPS3P23396 CANT1-202ENST00000392446 3252 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.634e-7■■■□□ 17.1
RPS3P23396 MCM3-202ENST00000419835 2523 ntTSL 2 BASIC12.31□□□□□ -0.447e-7■■■□□ 17.1
RPS3P23396 MCM3-201ENST00000229854 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.817e-7■■■□□ 17.1
RPS3P23396 MCM3-207ENST00000616552 3208 ntTSL 1 (best) BASIC9.09□□□□□ -0.957e-7■■■□□ 17.1
RPS3P23396 MCM3-205ENST00000596288 3169 ntTSL 1 (best) BASIC8.7□□□□□ -1.027e-7■■■□□ 17.1
RPS3P23396 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.19■□□□□ 0.662e-7■■■□□ 17.1
RPS3P23396 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.152e-7■■■□□ 17.1
RPS3P23396 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.61□□□□□ -0.072e-7■■■□□ 17.1
RPS3P23396 AL136295.1-201ENST00000530611 2740 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.652e-7■■■□□ 17.1
RPS3P23396 PMPCB-206ENST00000456433 904 ntTSL 516.83■□□□□ 0.282e-6■■■□□ 17.1
RPS3P23396 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.02■□□□□ 0.484e-10■■■□□ 17.1
RPS3P23396 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC11.6□□□□□ -0.554e-10■■■□□ 17.1
RPS3P23396 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.21■■□□□ 1.318e-11■■■□□ 17.1
RPS3P23396 FBXO7-204ENST00000425028 1921 ntTSL 520.59■□□□□ 0.898e-11■■■□□ 17.1
RPS3P23396 TMEM256-PLSCR3-203ENST00000571125 951 ntAPPRIS ALT2 TSL 519.66■□□□□ 0.743e-10■■■□□ 17.1
RPS3P23396 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.713e-10■■■□□ 17.1
RPS3P23396 FBXO7-203ENST00000420700 1900 ntTSL 517.25■□□□□ 0.358e-11■■■□□ 17.1
Retrieved 100 of 24,271 protein–RNA pairs in 300.2 ms