RNA–Protein interactions for RNA: ENST00000572882.2

ABCC1-204, Transcript of ATP binding cassette subfamily C member 1, humanhuman

TSL 1 (best)

Gene ABCC1, Length 4,565 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC1-204ENST00000572882 NISCHQ9Y2I1 1504 aa17.33■□□□□ 0.36
ABCC1-204ENST00000572882 DCAF8L2P0C7V8 631 aa17.21■□□□□ 0.35
ABCC1-204ENST00000572882 SUPT5HO00267 1087 aaKnown RBP16.32■□□□□ 0.2
ABCC1-204ENST00000572882 SHROOM4Q9ULL8 1493 aa16.05■□□□□ 0.16
ABCC1-204ENST00000572882 PELP1Q8IZL8 1130 aaKnown RBP15.73■□□□□ 0.11
ABCC1-204ENST00000572882 APLP2Q06481 763 aa15.52■□□□□ 0.08
ABCC1-204ENST00000572882 EHMT2Q96KQ7 1210 aa15.36■□□□□ 0.05
ABCC1-204ENST00000572882 FAM9AQ8IZU1 332 aaPredicted RBP15.32■□□□□ 0.04
ABCC1-204ENST00000572882 PCGF6Q9BYE7 350 aa15.31■□□□□ 0.04
ABCC1-204ENST00000572882 TRIM41Q8WV44 630 aa15.3■□□□□ 0.04
ABCC1-204ENST00000572882 ZEB1P37275 1124 aaPredicted RBP15.25■□□□□ 0.03
ABCC1-204ENST00000572882 CENPBP07199 599 aaPredicted RBP15.23■□□□□ 0.03
ABCC1-204ENST00000572882 MYT1Q01538 1121 aa15.09■□□□□ 0.01
ABCC1-204ENST00000572882 ABCC9O60706 1549 aa15.04■□□□□ -0
ABCC1-204ENST00000572882 UBTFP17480 764 aaKnown RBP15□□□□□ -0.01
ABCC1-204ENST00000572882 CCER1Q8TC90 406 aaPredicted RBP15□□□□□ -0.01
ABCC1-204ENST00000572882 ERICH6Q7L0X2 663 aa14.98□□□□□ -0.01
ABCC1-204ENST00000572882 TTBK1Q5TCY1 1321 aaPredicted RBP14.92□□□□□ -0.02
ABCC1-204ENST00000572882 TRIM26Q12899 539 aaPredicted RBP14.84□□□□□ -0.03
ABCC1-204ENST00000572882 CHIC1Q5VXU3 224 aa14.84□□□□□ -0.03
ABCC1-204ENST00000572882 PABPN1Q86U42 306 aaKnown RBP eCLIP14.8□□□□□ -0.04
ABCC1-204ENST00000572882 RANGAP1P46060 587 aaPredicted RBP14.79□□□□□ -0.04
ABCC1-204ENST00000572882 NEFLP07196 543 aa14.77□□□□□ -0.04
ABCC1-204ENST00000572882 ATP1B4Q9UN42 357 aaPredicted RBP14.75□□□□□ -0.05
ABCC1-204ENST00000572882 HRCP23327 699 aa14.74□□□□□ -0.05
ABCC1-204ENST00000572882 YTHDC1Q96MU7 727 aaKnown RBP14.66□□□□□ -0.06
ABCC1-204ENST00000572882 LOC105371045A0A1W2PR82 267 aa14.55□□□□□ -0.08
ABCC1-204ENST00000572882 PPARGC1BQ86YN6 1023 aaKnown RBP14.46□□□□□ -0.09
ABCC1-204ENST00000572882 ZCCHC6Q5VYS8 1495 aaKnown RBP14.38□□□□□ -0.11
ABCC1-204ENST00000572882 CCDC180Q9P1Z9 1646 aa14.35□□□□□ -0.11
ABCC1-204ENST00000572882 HNRNPUL2Q1KMD3 747 aaKnown RBP14.33□□□□□ -0.11
ABCC1-204ENST00000572882 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.32□□□□□ -0.12
ABCC1-204ENST00000572882 ITGAEP38570 1179 aa14.3□□□□□ -0.12
ABCC1-204ENST00000572882 MYT1LQ9UL68 1186 aa14.29□□□□□ -0.12
ABCC1-204ENST00000572882 DAXXQ9UER7 740 aaPredicted RBP14.28□□□□□ -0.12
ABCC1-204ENST00000572882 DIEXFQ68CQ4 756 aaKnown RBP14.24□□□□□ -0.13
ABCC1-204ENST00000572882 FBLN2P98095 1184 aa14.21□□□□□ -0.13
ABCC1-204ENST00000572882 CSRNP3Q8WYN3 585 aa14.19□□□□□ -0.14
ABCC1-204ENST00000572882 RTL5Q5HYW3 569 aaPredicted RBP14.1□□□□□ -0.15
ABCC1-204ENST00000572882 SCRIBQ14160 1630 aa14.1□□□□□ -0.15
ABCC1-204ENST00000572882 FAM50AQ14320 339 aaKnown RBP14.1□□□□□ -0.15
ABCC1-204ENST00000572882 POLR3GLQ9BT43 218 aa14.08□□□□□ -0.16
ABCC1-204ENST00000572882 GTF3C3Q9Y5Q9 886 aa14.04□□□□□ -0.16
ABCC1-204ENST00000572882 DCAF1Q9Y4B6 1507 aa14.02□□□□□ -0.16
ABCC1-204ENST00000572882 TRIM52Q96A61 297 aa13.99□□□□□ -0.17
ABCC1-204ENST00000572882 ZNF316A6NFI3 1004 aaPredicted RBP13.95□□□□□ -0.18
ABCC1-204ENST00000572882 RB1CC1Q8TDY2 1594 aa13.93□□□□□ -0.18
ABCC1-204ENST00000572882 CDK11AQ9UQ88 783 aaPredicted RBP13.92□□□□□ -0.18
ABCC1-204ENST00000572882 CNGB1Q14028 1251 aaPredicted RBP13.91□□□□□ -0.18
ABCC1-204ENST00000572882 NACADO15069 1562 aa13.91□□□□□ -0.18
ABCC1-204ENST00000572882 ACIN1Q9UKV3 1341 aaKnown RBP13.9□□□□□ -0.18
ABCC1-204ENST00000572882 CLSPNQ9HAW4 1339 aa13.89□□□□□ -0.19
ABCC1-204ENST00000572882 ANP32CO43423 234 aa13.89□□□□□ -0.19
ABCC1-204ENST00000572882 NEUROD1Q13562 356 aa13.88□□□□□ -0.19
ABCC1-204ENST00000572882 EEA1Q15075 1411 aa13.88□□□□□ -0.19
ABCC1-204ENST00000572882 NPM1P06748 294 aaKnown RBP eCLIP13.86□□□□□ -0.19
ABCC1-204ENST00000572882 BCANQ96GW7 911 aa13.84□□□□□ -0.19
ABCC1-204ENST00000572882 RSF1Q96T23 1441 aaPredicted RBP13.82□□□□□ -0.2
ABCC1-204ENST00000572882 P3H3Q8IVL6 736 aa13.76□□□□□ -0.21
ABCC1-204ENST00000572882 SLC4A1APQ9BWU0 796 aaKnown RBP13.75□□□□□ -0.21
ABCC1-204ENST00000572882 ZNF326Q5BKZ1 582 aaKnown RBP13.68□□□□□ -0.22
ABCC1-204ENST00000572882 CLIP1P30622 1438 aa13.68□□□□□ -0.22
ABCC1-204ENST00000572882 TONSLQ96HA7 1378 aa13.68□□□□□ -0.22
ABCC1-204ENST00000572882 BAZ1AQ9NRL2 1556 aaPredicted RBP13.66□□□□□ -0.22
ABCC1-204ENST00000572882 GOLGA3Q08378 1498 aa13.66□□□□□ -0.22
ABCC1-204ENST00000572882 CHMP7Q8WUX9 453 aaPredicted RBP13.66□□□□□ -0.22
ABCC1-204ENST00000572882 ERCC6Q03468 1493 aa13.65□□□□□ -0.22
ABCC1-204ENST00000572882 ANP32AP39687 249 aaKnown RBP13.64□□□□□ -0.23
ABCC1-204ENST00000572882 ESF1Q9H501 851 aaKnown RBP13.64□□□□□ -0.23
ABCC1-204ENST00000572882 WRNQ14191 1432 aaPredicted RBP eCLIP13.64□□□□□ -0.239e-6■■■■■ 50.1
ABCC1-204ENST00000572882 BAZ1BQ9UIG0 1483 aaKnown RBP13.61□□□□□ -0.23
ABCC1-204ENST00000572882 ZNF777Q9ULD5 760 aaPredicted RBP13.61□□□□□ -0.23
ABCC1-204ENST00000572882 TNIKQ9UKE5 1360 aa13.61□□□□□ -0.23
ABCC1-204ENST00000572882 MTUS2Q5JR59 1369 aa13.59□□□□□ -0.23
ABCC1-204ENST00000572882 ARID3CA6NKF2 412 aa13.57□□□□□ -0.24
ABCC1-204ENST00000572882 CEP164Q9UPV0 1460 aa13.57□□□□□ -0.24
ABCC1-204ENST00000572882 CEP162Q5TB80 1403 aa13.57□□□□□ -0.24
ABCC1-204ENST00000572882 KIF27Q86VH2 1401 aa13.57□□□□□ -0.24
ABCC1-204ENST00000572882 NEFMP07197 916 aa13.56□□□□□ -0.24
ABCC1-204ENST00000572882 ZBTB47Q9UFB7 747 aaPredicted RBP13.56□□□□□ -0.24
ABCC1-204ENST00000572882 TSPY4P0CV99 314 aa13.54□□□□□ -0.24
ABCC1-204ENST00000572882 TSPY10P0CW01 314 aa13.54□□□□□ -0.24
ABCC1-204ENST00000572882 MYO15BQ96JP2 1530 aa13.54□□□□□ -0.24
ABCC1-204ENST00000572882 FKBP8Q14318 412 aa13.53□□□□□ -0.24
ABCC1-204ENST00000572882 TRHP20396 242 aaPredicted RBP13.53□□□□□ -0.24
ABCC1-204ENST00000572882 PLPPR3Q6T4P5 718 aa13.52□□□□□ -0.24
ABCC1-204ENST00000572882 CANXP27824 592 aaKnown RBP13.5□□□□□ -0.25
ABCC1-204ENST00000572882 DDX10Q13206 875 aaKnown RBP13.44□□□□□ -0.26
ABCC1-204ENST00000572882 SCAF1Q9H7N4 1312 aaKnown RBP13.44□□□□□ -0.26
ABCC1-204ENST00000572882 NPM2Q86SE8 214 aaKnown RBP13.44□□□□□ -0.26
ABCC1-204ENST00000572882 CECR2Q9BXF3 1484 aa13.44□□□□□ -0.26
ABCC1-204ENST00000572882 HNRNPUQ00839 825 aaKnown RBP eCLIP13.43□□□□□ -0.26
ABCC1-204ENST00000572882 CHIC2Q9UKJ5 165 aa13.41□□□□□ -0.26
ABCC1-204ENST00000572882 PLEKHD1A6NEE1 506 aa13.4□□□□□ -0.26
ABCC1-204ENST00000572882 EIF5BO60841 1220 aaKnown RBP13.4□□□□□ -0.26
ABCC1-204ENST00000572882 EIF4G2P78344 907 aaKnown RBP eCLIP13.39□□□□□ -0.273e-8■■■■■ 49.4
ABCC1-204ENST00000572882 FHAD1B1AJZ9 1412 aa13.39□□□□□ -0.27
ABCC1-204ENST00000572882 ANP32BQ92688 251 aaKnown RBP13.37□□□□□ -0.27
ABCC1-204ENST00000572882 TMC1Q8TDI8 760 aa13.36□□□□□ -0.27
ABCC1-204ENST00000572882 UPF2Q9HAU5 1272 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms