Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 AP006587.1-201ENST00000534129 1502 ntBASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.43□□□□□ -0.26
TRAV9-2A0A087WT02 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 AC124016.1-201ENST00000609552 612 ntBASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 PHGDH-210ENST00000641115 1638 ntBASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRAV9-2A0A087WT02 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 MME-217ENST00000616757 1315 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 PEX7-202ENST00000367756 680 ntTSL 3 BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 KRT16P5-201ENST00000455284 522 ntBASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 AC098590.1-201ENST00000468126 897 ntBASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 HYMAI-201ENST00000635591 3347 ntBASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV9-2A0A087WT02 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms