Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC21.79■■□□□ 1.08
RPAP1Q9BWH6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.79■■□□□ 1.08
RPAP1Q9BWH6 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RPAP1Q9BWH6 AC004263.2-201ENST00000617183 678 ntBASIC21.79■■□□□ 1.08
RPAP1Q9BWH6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.79■■□□□ 1.08
RPAP1Q9BWH6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RPAP1Q9BWH6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPAP1Q9BWH6 AP000997.3-201ENST00000623333 2250 ntBASIC21.79■■□□□ 1.08
RPAP1Q9BWH6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC21.79■■□□□ 1.08
RPAP1Q9BWH6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
RPAP1Q9BWH6 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPAP1Q9BWH6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
RPAP1Q9BWH6 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RPAP1Q9BWH6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RPAP1Q9BWH6 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RPAP1Q9BWH6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.79■■□□□ 1.08
RPAP1Q9BWH6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RPAP1Q9BWH6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC21.79■■□□□ 1.08
RPAP1Q9BWH6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RPAP1Q9BWH6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.78■■□□□ 1.08
RPAP1Q9BWH6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPAP1Q9BWH6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
RPAP1Q9BWH6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPAP1Q9BWH6 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC21.78■■□□□ 1.08
RPAP1Q9BWH6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPAP1Q9BWH6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.78■■□□□ 1.08
RPAP1Q9BWH6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RPAP1Q9BWH6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.78■■□□□ 1.08
RPAP1Q9BWH6 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.78■■□□□ 1.08
RPAP1Q9BWH6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC21.78■■□□□ 1.08
RPAP1Q9BWH6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RPAP1Q9BWH6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21.78■■□□□ 1.08
RPAP1Q9BWH6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPAP1Q9BWH6 HLA-A-201ENST00000376802 1334 ntBASIC21.78■■□□□ 1.08
RPAP1Q9BWH6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPAP1Q9BWH6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.78■■□□□ 1.08
RPAP1Q9BWH6 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPAP1Q9BWH6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
RPAP1Q9BWH6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPAP1Q9BWH6 AL096828.2-201ENST00000567259 1965 ntBASIC21.78■■□□□ 1.08
RPAP1Q9BWH6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RPAP1Q9BWH6 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
RPAP1Q9BWH6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPAP1Q9BWH6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPAP1Q9BWH6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPAP1Q9BWH6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RPAP1Q9BWH6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.77■■□□□ 1.08
RPAP1Q9BWH6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RPAP1Q9BWH6 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPAP1Q9BWH6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.77■■□□□ 1.08
RPAP1Q9BWH6 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC21.77■■□□□ 1.08
RPAP1Q9BWH6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPAP1Q9BWH6 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPAP1Q9BWH6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC21.77■■□□□ 1.08
RPAP1Q9BWH6 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPAP1Q9BWH6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
RPAP1Q9BWH6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.77■■□□□ 1.08
RPAP1Q9BWH6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPAP1Q9BWH6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.77■■□□□ 1.08
RPAP1Q9BWH6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPAP1Q9BWH6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPAP1Q9BWH6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPAP1Q9BWH6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.77■■□□□ 1.08
RPAP1Q9BWH6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RPAP1Q9BWH6 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPAP1Q9BWH6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
RPAP1Q9BWH6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC21.77■■□□□ 1.08
RPAP1Q9BWH6 LINC01126-201ENST00000623515 1646 ntBASIC21.77■■□□□ 1.08
RPAP1Q9BWH6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
RPAP1Q9BWH6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RPAP1Q9BWH6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
RPAP1Q9BWH6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RPAP1Q9BWH6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
RPAP1Q9BWH6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
RPAP1Q9BWH6 REXO1L9P-201ENST00000604264 2108 ntBASIC21.76■■□□□ 1.07
RPAP1Q9BWH6 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.76■■□□□ 1.07
RPAP1Q9BWH6 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPAP1Q9BWH6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC21.76■■□□□ 1.07
RPAP1Q9BWH6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RPAP1Q9BWH6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.76■■□□□ 1.07
RPAP1Q9BWH6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
RPAP1Q9BWH6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.76■■□□□ 1.07
RPAP1Q9BWH6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
RPAP1Q9BWH6 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.76■■□□□ 1.07
RPAP1Q9BWH6 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RPAP1Q9BWH6 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.76■■□□□ 1.07
RPAP1Q9BWH6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RPAP1Q9BWH6 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
RPAP1Q9BWH6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.76■■□□□ 1.07
RPAP1Q9BWH6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RPAP1Q9BWH6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPAP1Q9BWH6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.76■■□□□ 1.07
RPAP1Q9BWH6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPAP1Q9BWH6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.76■■□□□ 1.07
RPAP1Q9BWH6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPAP1Q9BWH6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPAP1Q9BWH6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RPAP1Q9BWH6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RPAP1Q9BWH6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RPAP1Q9BWH6 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms