Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF25Q96BH1 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF25Q96BH1 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF25Q96BH1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF25Q96BH1 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC18.92■□□□□ 0.62
RNF25Q96BH1 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC18.92■□□□□ 0.62
RNF25Q96BH1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF25Q96BH1 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.92■□□□□ 0.62
RNF25Q96BH1 AC137695.1-201ENST00000604126 489 ntBASIC18.92■□□□□ 0.62
RNF25Q96BH1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.92■□□□□ 0.62
RNF25Q96BH1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF25Q96BH1 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF25Q96BH1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
RNF25Q96BH1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF25Q96BH1 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF25Q96BH1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF25Q96BH1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF25Q96BH1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF25Q96BH1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF25Q96BH1 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RNF25Q96BH1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF25Q96BH1 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RNF25Q96BH1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF25Q96BH1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF25Q96BH1 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF25Q96BH1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF25Q96BH1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RNF25Q96BH1 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF25Q96BH1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF25Q96BH1 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RNF25Q96BH1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RNF25Q96BH1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF25Q96BH1 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF25Q96BH1 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF25Q96BH1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF25Q96BH1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
RNF25Q96BH1 AC108860.2-201ENST00000562760 2183 ntBASIC18.91■□□□□ 0.62
RNF25Q96BH1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF25Q96BH1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF25Q96BH1 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF25Q96BH1 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.91■□□□□ 0.62
RNF25Q96BH1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.91■□□□□ 0.62
RNF25Q96BH1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF25Q96BH1 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF25Q96BH1 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF25Q96BH1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF25Q96BH1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF25Q96BH1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF25Q96BH1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF25Q96BH1 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF25Q96BH1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF25Q96BH1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF25Q96BH1 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF25Q96BH1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RNF25Q96BH1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF25Q96BH1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF25Q96BH1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF25Q96BH1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF25Q96BH1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF25Q96BH1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF25Q96BH1 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RNF25Q96BH1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RNF25Q96BH1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF25Q96BH1 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF25Q96BH1 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF25Q96BH1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF25Q96BH1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
RNF25Q96BH1 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF25Q96BH1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
RNF25Q96BH1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF25Q96BH1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.9■□□□□ 0.62
RNF25Q96BH1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.9■□□□□ 0.62
RNF25Q96BH1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF25Q96BH1 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF25Q96BH1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF25Q96BH1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF25Q96BH1 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF25Q96BH1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.9■□□□□ 0.62
RNF25Q96BH1 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC18.9■□□□□ 0.62
RNF25Q96BH1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF25Q96BH1 AC107308.1-201ENST00000615897 301 ntBASIC18.9■□□□□ 0.62
RNF25Q96BH1 AC066615.1-201ENST00000640911 628 ntBASIC18.9■□□□□ 0.62
RNF25Q96BH1 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF25Q96BH1 PP12613-201ENST00000424958 2230 ntBASIC18.9■□□□□ 0.62
RNF25Q96BH1 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RNF25Q96BH1 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF25Q96BH1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
RNF25Q96BH1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF25Q96BH1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF25Q96BH1 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF25Q96BH1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF25Q96BH1 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF25Q96BH1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
RNF25Q96BH1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF25Q96BH1 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF25Q96BH1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF25Q96BH1 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.62
RNF25Q96BH1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.89■□□□□ 0.62
RNF25Q96BH1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF25Q96BH1 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms