Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CROCCP3Q8IVE0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CROCCP3Q8IVE0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CROCCP3Q8IVE0 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CROCCP3Q8IVE0 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CROCCP3Q8IVE0 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.31■□□□□ 0.2
CROCCP3Q8IVE0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.31■□□□□ 0.2
CROCCP3Q8IVE0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.31■□□□□ 0.2
CROCCP3Q8IVE0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.31■□□□□ 0.2
CROCCP3Q8IVE0 DUX4L16-201ENST00000555130 1264 ntBASIC16.31■□□□□ 0.2
CROCCP3Q8IVE0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.31■□□□□ 0.2
CROCCP3Q8IVE0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CROCCP3Q8IVE0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CROCCP3Q8IVE0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.31■□□□□ 0.2
CROCCP3Q8IVE0 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CROCCP3Q8IVE0 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CROCCP3Q8IVE0 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
CROCCP3Q8IVE0 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.31■□□□□ 0.2
CROCCP3Q8IVE0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CROCCP3Q8IVE0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CROCCP3Q8IVE0 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CROCCP3Q8IVE0 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CROCCP3Q8IVE0 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 RCC2P6-201ENST00000526625 1557 ntBASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 MTMR9LP-203ENST00000426597 1545 ntBASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.3■□□□□ 0.2
CROCCP3Q8IVE0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 TCAF2P1-201ENST00000291129 2421 ntBASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 KRT8P45-201ENST00000414328 1447 ntBASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CROCCP3Q8IVE0 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms