Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CL1P78423 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CL1P78423 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CL1P78423 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CL1P78423 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CL1P78423 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CL1P78423 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.5□□□□□ -0.09
CX3CL1P78423 SIRPAP1-201ENST00000448467 1770 ntBASIC14.5□□□□□ -0.09
CX3CL1P78423 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.5□□□□□ -0.09
CX3CL1P78423 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC14.5□□□□□ -0.09
CX3CL1P78423 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CL1P78423 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CL1P78423 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CL1P78423 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CL1P78423 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CL1P78423 STARP1-201ENST00000397973 869 ntBASIC14.5□□□□□ -0.09
CX3CL1P78423 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CL1P78423 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC14.5□□□□□ -0.09
CX3CL1P78423 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CL1P78423 HOMER2P1-201ENST00000455653 964 ntBASIC14.5□□□□□ -0.09
CX3CL1P78423 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.5□□□□□ -0.09
CX3CL1P78423 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CL1P78423 KRT18P21-201ENST00000515767 1272 ntBASIC14.5□□□□□ -0.09
CX3CL1P78423 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.5□□□□□ -0.09
CX3CL1P78423 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.5□□□□□ -0.09
CX3CL1P78423 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.5□□□□□ -0.09
CX3CL1P78423 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.5□□□□□ -0.09
CX3CL1P78423 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CL1P78423 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CL1P78423 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CL1P78423 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CX3CL1P78423 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CL1P78423 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CL1P78423 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CL1P78423 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CL1P78423 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CL1P78423 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CL1P78423 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CL1P78423 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CX3CL1P78423 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CX3CL1P78423 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.5□□□□□ -0.09
CX3CL1P78423 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.5□□□□□ -0.09
CX3CL1P78423 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.5□□□□□ -0.09
CX3CL1P78423 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CL1P78423 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CX3CL1P78423 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.49□□□□□ -0.09
CX3CL1P78423 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CL1P78423 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CX3CL1P78423 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CX3CL1P78423 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CL1P78423 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CX3CL1P78423 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CL1P78423 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CL1P78423 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CL1P78423 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CL1P78423 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CL1P78423 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CL1P78423 AC092647.4-201ENST00000457211 535 ntBASIC14.49□□□□□ -0.09
CX3CL1P78423 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.49□□□□□ -0.09
CX3CL1P78423 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CL1P78423 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC14.49□□□□□ -0.09
CX3CL1P78423 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.49□□□□□ -0.09
CX3CL1P78423 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC14.49□□□□□ -0.09
CX3CL1P78423 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CL1P78423 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CX3CL1P78423 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
CX3CL1P78423 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.49□□□□□ -0.09
CX3CL1P78423 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CL1P78423 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CL1P78423 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CL1P78423 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CL1P78423 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CX3CL1P78423 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CL1P78423 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CX3CL1P78423 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CX3CL1P78423 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CL1P78423 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CL1P78423 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CL1P78423 AL024508.2-201ENST00000607749 1894 ntBASIC14.48□□□□□ -0.09
CX3CL1P78423 LINC01126-201ENST00000623515 1646 ntBASIC14.48□□□□□ -0.09
CX3CL1P78423 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CL1P78423 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CL1P78423 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CL1P78423 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CL1P78423 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CL1P78423 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CX3CL1P78423 AC106820.2-201ENST00000563775 3264 ntBASIC14.48□□□□□ -0.09
CX3CL1P78423 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CL1P78423 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CL1P78423 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CX3CL1P78423 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CL1P78423 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CX3CL1P78423 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.48□□□□□ -0.09
CX3CL1P78423 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CL1P78423 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CL1P78423 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CL1P78423 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CX3CL1P78423 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CX3CL1P78423 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.48□□□□□ -0.09
CX3CL1P78423 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms