Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.66■□□□□ 0.42
GTF2A1P52655 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GTF2A1P52655 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC17.66■□□□□ 0.42
GTF2A1P52655 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
GTF2A1P52655 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
GTF2A1P52655 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
GTF2A1P52655 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2A1P52655 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2A1P52655 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2A1P52655 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
GTF2A1P52655 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2A1P52655 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2A1P52655 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2A1P52655 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2A1P52655 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2A1P52655 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2A1P52655 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2A1P52655 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2A1P52655 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2A1P52655 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2A1P52655 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.65■□□□□ 0.42
GTF2A1P52655 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2A1P52655 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2A1P52655 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.65■□□□□ 0.42
GTF2A1P52655 AC105265.2-201ENST00000467189 838 ntBASIC17.65■□□□□ 0.42
GTF2A1P52655 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.65■□□□□ 0.42
GTF2A1P52655 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.65■□□□□ 0.42
GTF2A1P52655 CCDC92B-201ENST00000575506 885 ntBASIC17.65■□□□□ 0.42
GTF2A1P52655 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
GTF2A1P52655 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.65■□□□□ 0.42
GTF2A1P52655 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2A1P52655 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.65■□□□□ 0.42
GTF2A1P52655 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC17.65■□□□□ 0.42
GTF2A1P52655 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2A1P52655 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2A1P52655 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2A1P52655 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.65■□□□□ 0.42
GTF2A1P52655 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2A1P52655 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2A1P52655 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.65■□□□□ 0.42
GTF2A1P52655 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2A1P52655 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2A1P52655 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
GTF2A1P52655 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
GTF2A1P52655 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.65■□□□□ 0.42
GTF2A1P52655 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
GTF2A1P52655 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
GTF2A1P52655 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.64■□□□□ 0.42
GTF2A1P52655 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
GTF2A1P52655 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
GTF2A1P52655 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
GTF2A1P52655 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.64■□□□□ 0.41
GTF2A1P52655 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2A1P52655 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.64■□□□□ 0.41
GTF2A1P52655 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2A1P52655 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
GTF2A1P52655 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2A1P52655 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
GTF2A1P52655 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.64■□□□□ 0.41
GTF2A1P52655 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2A1P52655 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
GTF2A1P52655 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
GTF2A1P52655 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2A1P52655 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2A1P52655 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2A1P52655 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.64■□□□□ 0.41
GTF2A1P52655 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.64■□□□□ 0.41
GTF2A1P52655 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.64■□□□□ 0.41
GTF2A1P52655 AC243732.1-201ENST00000612648 864 ntBASIC17.64■□□□□ 0.41
GTF2A1P52655 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
GTF2A1P52655 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2A1P52655 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2A1P52655 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2A1P52655 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2A1P52655 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.64■□□□□ 0.41
GTF2A1P52655 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2A1P52655 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2A1P52655 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2A1P52655 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.64■□□□□ 0.41
GTF2A1P52655 AL513523.2-202ENST00000427283 2040 ntBASIC17.64■□□□□ 0.41
GTF2A1P52655 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2A1P52655 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
GTF2A1P52655 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GTF2A1P52655 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
GTF2A1P52655 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
GTF2A1P52655 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.63■□□□□ 0.41
GTF2A1P52655 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.63■□□□□ 0.41
GTF2A1P52655 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.63■□□□□ 0.41
GTF2A1P52655 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GTF2A1P52655 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
GTF2A1P52655 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
GTF2A1P52655 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.63■□□□□ 0.41
GTF2A1P52655 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.63■□□□□ 0.41
GTF2A1P52655 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.63■□□□□ 0.41
GTF2A1P52655 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.63■□□□□ 0.41
GTF2A1P52655 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
GTF2A1P52655 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.63■□□□□ 0.41
GTF2A1P52655 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
GTF2A1P52655 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
GTF2A1P52655 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms