Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDH17O14917 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDH17O14917 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDH17O14917 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH17O14917 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH17O14917 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDH17O14917 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH17O14917 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH17O14917 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDH17O14917 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
PCDH17O14917 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH17O14917 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH17O14917 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH17O14917 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
PCDH17O14917 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PCDH17O14917 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PCDH17O14917 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PCDH17O14917 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
PCDH17O14917 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH17O14917 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDH17O14917 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDH17O14917 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PCDH17O14917 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH17O14917 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDH17O14917 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.17■□□□□ 0.34
PCDH17O14917 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.17■□□□□ 0.34
PCDH17O14917 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDH17O14917 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.17■□□□□ 0.34
PCDH17O14917 NPAP1P7-201ENST00000613027 823 ntBASIC17.17■□□□□ 0.34
PCDH17O14917 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH17O14917 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDH17O14917 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH17O14917 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH17O14917 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDH17O14917 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH17O14917 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH17O14917 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.17■□□□□ 0.34
PCDH17O14917 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH17O14917 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PCDH17O14917 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PCDH17O14917 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PCDH17O14917 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH17O14917 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDH17O14917 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH17O14917 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDH17O14917 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH17O14917 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH17O14917 AC016734.2-201ENST00000624325 1377 ntBASIC17.16■□□□□ 0.34
PCDH17O14917 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH17O14917 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH17O14917 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH17O14917 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDH17O14917 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PCDH17O14917 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH17O14917 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH17O14917 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDH17O14917 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH17O14917 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDH17O14917 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH17O14917 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDH17O14917 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH17O14917 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDH17O14917 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDH17O14917 AC113404.2-201ENST00000507884 177 ntBASIC17.16■□□□□ 0.34
PCDH17O14917 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDH17O14917 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDH17O14917 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDH17O14917 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH17O14917 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDH17O14917 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
PCDH17O14917 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH17O14917 AC009102.3-201ENST00000623118 1491 ntBASIC17.16■□□□□ 0.34
PCDH17O14917 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDH17O14917 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.16■□□□□ 0.34
PCDH17O14917 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH17O14917 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDH17O14917 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH17O14917 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH17O14917 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH17O14917 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH17O14917 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDH17O14917 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH17O14917 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH17O14917 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDH17O14917 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH17O14917 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.15■□□□□ 0.34
PCDH17O14917 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH17O14917 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PCDH17O14917 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH17O14917 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDH17O14917 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH17O14917 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH17O14917 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH17O14917 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH17O14917 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH17O14917 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH17O14917 IGHGP-201ENST00000390555 1178 ntBASIC17.15■□□□□ 0.34
PCDH17O14917 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.15■□□□□ 0.34
PCDH17O14917 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.15■□□□□ 0.34
PCDH17O14917 AL390719.2-201ENST00000606993 987 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms