Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CNKSR1Q969H4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CNKSR1Q969H4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CNKSR1Q969H4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
CNKSR1Q969H4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CNKSR1Q969H4 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CNKSR1Q969H4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC21.93■■□□□ 1.1
CNKSR1Q969H4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
CNKSR1Q969H4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC21.93■■□□□ 1.1
CNKSR1Q969H4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CNKSR1Q969H4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC21.93■■□□□ 1.1
CNKSR1Q969H4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CNKSR1Q969H4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CNKSR1Q969H4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CNKSR1Q969H4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.92■■□□□ 1.1
CNKSR1Q969H4 GMCL1P1-201ENST00000463439 1581 ntBASIC21.92■■□□□ 1.1
CNKSR1Q969H4 GPR89P-201ENST00000407924 1495 ntBASIC21.92■■□□□ 1.1
CNKSR1Q969H4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CNKSR1Q969H4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
CNKSR1Q969H4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CNKSR1Q969H4 MIR770-201ENST00000390219 98 ntBASIC21.92■■□□□ 1.1
CNKSR1Q969H4 SYS1-203ENST00000414310 795 ntTSL 3 BASIC21.92■■□□□ 1.1
CNKSR1Q969H4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC21.92■■□□□ 1.1
CNKSR1Q969H4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC21.92■■□□□ 1.1
CNKSR1Q969H4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC21.92■■□□□ 1.1
CNKSR1Q969H4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21.92■■□□□ 1.1
CNKSR1Q969H4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC21.92■■□□□ 1.1
CNKSR1Q969H4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC21.92■■□□□ 1.1
CNKSR1Q969H4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CNKSR1Q969H4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.92■■□□□ 1.1
CNKSR1Q969H4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CNKSR1Q969H4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC21.92■■□□□ 1.1
CNKSR1Q969H4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CNKSR1Q969H4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CNKSR1Q969H4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CNKSR1Q969H4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CNKSR1Q969H4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.91■■□□□ 1.1
CNKSR1Q969H4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CNKSR1Q969H4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CNKSR1Q969H4 NCF1C-201ENST00000438382 1427 ntBASIC21.91■■□□□ 1.1
CNKSR1Q969H4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.91■■□□□ 1.1
CNKSR1Q969H4 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC21.91■■□□□ 1.1
CNKSR1Q969H4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CNKSR1Q969H4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC21.91■■□□□ 1.1
CNKSR1Q969H4 COX5BP2-201ENST00000392354 334 ntBASIC21.91■■□□□ 1.1
CNKSR1Q969H4 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC21.91■■□□□ 1.1
CNKSR1Q969H4 RPS15P9-201ENST00000494093 319 ntBASIC21.91■■□□□ 1.1
CNKSR1Q969H4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC21.91■■□□□ 1.1
CNKSR1Q969H4 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CNKSR1Q969H4 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC21.91■■□□□ 1.1
CNKSR1Q969H4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC21.91■■□□□ 1.1
CNKSR1Q969H4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CNKSR1Q969H4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CNKSR1Q969H4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CNKSR1Q969H4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CNKSR1Q969H4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CNKSR1Q969H4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CNKSR1Q969H4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC21.91■■□□□ 1.1
CNKSR1Q969H4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CNKSR1Q969H4 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CNKSR1Q969H4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.9■■□□□ 1.1
CNKSR1Q969H4 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CNKSR1Q969H4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.9■■□□□ 1.1
CNKSR1Q969H4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CNKSR1Q969H4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC21.9■■□□□ 1.1
CNKSR1Q969H4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC21.9■■□□□ 1.1
CNKSR1Q969H4 AC011467.4-201ENST00000594891 528 ntBASIC21.9■■□□□ 1.1
CNKSR1Q969H4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC21.9■■□□□ 1.1
CNKSR1Q969H4 AC106028.4-201ENST00000614509 607 ntBASIC21.9■■□□□ 1.1
CNKSR1Q969H4 AC004790.2-201ENST00000623588 572 ntBASIC21.9■■□□□ 1.1
CNKSR1Q969H4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC21.9■■□□□ 1.1
CNKSR1Q969H4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CNKSR1Q969H4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CNKSR1Q969H4 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CNKSR1Q969H4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CNKSR1Q969H4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.9■■□□□ 1.1
CNKSR1Q969H4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.9■■□□□ 1.1
CNKSR1Q969H4 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC21.9■■□□□ 1.1
CNKSR1Q969H4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CNKSR1Q969H4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CNKSR1Q969H4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CNKSR1Q969H4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CNKSR1Q969H4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.89■■□□□ 1.1
CNKSR1Q969H4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
CNKSR1Q969H4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.1
CNKSR1Q969H4 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
CNKSR1Q969H4 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.1
CNKSR1Q969H4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC21.89■■□□□ 1.09
CNKSR1Q969H4 CFL1-212ENST00000531413 636 ntTSL 3 BASIC21.89■■□□□ 1.09
CNKSR1Q969H4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC21.89■■□□□ 1.09
CNKSR1Q969H4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC21.89■■□□□ 1.09
CNKSR1Q969H4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC21.89■■□□□ 1.09
CNKSR1Q969H4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC21.89■■□□□ 1.09
CNKSR1Q969H4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CNKSR1Q969H4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CNKSR1Q969H4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC21.89■■□□□ 1.09
CNKSR1Q969H4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CNKSR1Q969H4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CNKSR1Q969H4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CNKSR1Q969H4 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms