Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 ZNF815P-204ENST00000434898 1737 ntBASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM88Q6PEY1 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 AC026691.1-201ENST00000602502 2017 ntBASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM88Q6PEY1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 GUSBP6-202ENST00000438529 1198 ntBASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 GAMT-205ENST00000640762 751 ntTSL 5 BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 KRT8P17-201ENST00000453110 1448 ntBASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM88Q6PEY1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms