Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
UBL4AP11441 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UBL4AP11441 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.68■□□□□ 0.26
UBL4AP11441 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
UBL4AP11441 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBL4AP11441 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBL4AP11441 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBL4AP11441 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBL4AP11441 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBL4AP11441 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBL4AP11441 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UBL4AP11441 RNF152P1-201ENST00000397754 604 ntBASIC16.68■□□□□ 0.26
UBL4AP11441 STARP1-201ENST00000397973 869 ntBASIC16.68■□□□□ 0.26
UBL4AP11441 AK4P3-201ENST00000418260 669 ntBASIC16.68■□□□□ 0.26
UBL4AP11441 SPDYE15P-201ENST00000424157 909 ntBASIC16.68■□□□□ 0.26
UBL4AP11441 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.68■□□□□ 0.26
UBL4AP11441 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.68■□□□□ 0.26
UBL4AP11441 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.68■□□□□ 0.26
UBL4AP11441 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.68■□□□□ 0.26
UBL4AP11441 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UBL4AP11441 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.68■□□□□ 0.26
UBL4AP11441 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBL4AP11441 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.68■□□□□ 0.26
UBL4AP11441 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBL4AP11441 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.68■□□□□ 0.26
UBL4AP11441 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBL4AP11441 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
UBL4AP11441 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
UBL4AP11441 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBL4AP11441 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UBL4AP11441 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBL4AP11441 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UBL4AP11441 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBL4AP11441 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.68■□□□□ 0.26
UBL4AP11441 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
UBL4AP11441 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBL4AP11441 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBL4AP11441 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBL4AP11441 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBL4AP11441 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBL4AP11441 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
UBL4AP11441 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.67■□□□□ 0.26
UBL4AP11441 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBL4AP11441 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.67■□□□□ 0.26
UBL4AP11441 TSPY5P-201ENST00000426936 936 ntBASIC16.67■□□□□ 0.26
UBL4AP11441 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBL4AP11441 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBL4AP11441 HOMER2P1-201ENST00000455653 964 ntBASIC16.67■□□□□ 0.26
UBL4AP11441 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.67■□□□□ 0.26
UBL4AP11441 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.67■□□□□ 0.26
UBL4AP11441 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBL4AP11441 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBL4AP11441 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBL4AP11441 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBL4AP11441 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBL4AP11441 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBL4AP11441 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.67■□□□□ 0.26
UBL4AP11441 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBL4AP11441 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBL4AP11441 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.67■□□□□ 0.26
UBL4AP11441 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
UBL4AP11441 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBL4AP11441 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
UBL4AP11441 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.67■□□□□ 0.26
UBL4AP11441 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBL4AP11441 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBL4AP11441 AC093010.1-201ENST00000473625 1624 ntBASIC16.67■□□□□ 0.26
UBL4AP11441 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.67■□□□□ 0.26
UBL4AP11441 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBL4AP11441 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBL4AP11441 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBL4AP11441 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBL4AP11441 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBL4AP11441 AC138028.4-201ENST00000564984 1845 ntBASIC16.66■□□□□ 0.26
UBL4AP11441 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBL4AP11441 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
UBL4AP11441 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.66■□□□□ 0.26
UBL4AP11441 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
UBL4AP11441 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBL4AP11441 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
UBL4AP11441 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBL4AP11441 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBL4AP11441 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBL4AP11441 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBL4AP11441 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBL4AP11441 AC092647.4-201ENST00000457211 535 ntBASIC16.66■□□□□ 0.26
UBL4AP11441 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBL4AP11441 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.66■□□□□ 0.26
UBL4AP11441 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.66■□□□□ 0.26
UBL4AP11441 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.66■□□□□ 0.26
UBL4AP11441 AL136038.4-201ENST00000603606 1261 ntBASIC16.66■□□□□ 0.26
UBL4AP11441 AL596257.1-201ENST00000641463 2694 ntBASIC16.66■□□□□ 0.26
UBL4AP11441 OR6D1P-202ENST00000641007 5290 ntBASIC16.66■□□□□ 0.26
UBL4AP11441 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBL4AP11441 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBL4AP11441 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBL4AP11441 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.66■□□□□ 0.26
UBL4AP11441 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.66■□□□□ 0.26
UBL4AP11441 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBL4AP11441 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms