Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
POLR3DP05423 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.5■■□□□ 1.03
POLR3DP05423 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
POLR3DP05423 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.5■■□□□ 1.03
POLR3DP05423 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
POLR3DP05423 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
POLR3DP05423 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
POLR3DP05423 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
POLR3DP05423 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
POLR3DP05423 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
POLR3DP05423 NUS1P2-201ENST00000417358 873 ntBASIC21.5■■□□□ 1.03
POLR3DP05423 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.5■■□□□ 1.03
POLR3DP05423 EMBP1-201ENST00000458200 901 ntBASIC21.5■■□□□ 1.03
POLR3DP05423 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.5■■□□□ 1.03
POLR3DP05423 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC21.5■■□□□ 1.03
POLR3DP05423 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
POLR3DP05423 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
POLR3DP05423 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.5■■□□□ 1.03
POLR3DP05423 AC073592.3-201ENST00000625118 1834 ntBASIC21.5■■□□□ 1.03
POLR3DP05423 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
POLR3DP05423 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
POLR3DP05423 ESPNP-201ENST00000270691 2015 ntBASIC21.5■■□□□ 1.03
POLR3DP05423 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.5■■□□□ 1.03
POLR3DP05423 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
POLR3DP05423 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
POLR3DP05423 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
POLR3DP05423 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
POLR3DP05423 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
POLR3DP05423 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
POLR3DP05423 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
POLR3DP05423 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.49■■□□□ 1.03
POLR3DP05423 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
POLR3DP05423 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
POLR3DP05423 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
POLR3DP05423 AL390961.4-201ENST00000623958 2535 ntBASIC21.49■■□□□ 1.03
POLR3DP05423 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.49■■□□□ 1.03
POLR3DP05423 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
POLR3DP05423 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
POLR3DP05423 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
POLR3DP05423 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.49■■□□□ 1.03
POLR3DP05423 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.49■■□□□ 1.03
POLR3DP05423 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.49■■□□□ 1.03
POLR3DP05423 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.49■■□□□ 1.03
POLR3DP05423 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
POLR3DP05423 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.49■■□□□ 1.03
POLR3DP05423 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
POLR3DP05423 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
POLR3DP05423 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
POLR3DP05423 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
POLR3DP05423 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
POLR3DP05423 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.49■■□□□ 1.03
POLR3DP05423 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
POLR3DP05423 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
POLR3DP05423 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
POLR3DP05423 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
POLR3DP05423 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
POLR3DP05423 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
POLR3DP05423 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
POLR3DP05423 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
POLR3DP05423 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
POLR3DP05423 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
POLR3DP05423 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.48■■□□□ 1.03
POLR3DP05423 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
POLR3DP05423 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.48■■□□□ 1.03
POLR3DP05423 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
POLR3DP05423 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
POLR3DP05423 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC21.48■■□□□ 1.03
POLR3DP05423 MTCL1P1-201ENST00000446207 792 ntBASIC21.48■■□□□ 1.03
POLR3DP05423 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.48■■□□□ 1.03
POLR3DP05423 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.48■■□□□ 1.03
POLR3DP05423 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
POLR3DP05423 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
POLR3DP05423 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
POLR3DP05423 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
POLR3DP05423 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.48■■□□□ 1.03
POLR3DP05423 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
POLR3DP05423 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
POLR3DP05423 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
POLR3DP05423 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
POLR3DP05423 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.48■■□□□ 1.03
POLR3DP05423 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.48■■□□□ 1.03
POLR3DP05423 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.48■■□□□ 1.03
POLR3DP05423 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
POLR3DP05423 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
POLR3DP05423 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
POLR3DP05423 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
POLR3DP05423 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
POLR3DP05423 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
POLR3DP05423 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
POLR3DP05423 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
POLR3DP05423 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.47■■□□□ 1.03
POLR3DP05423 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
POLR3DP05423 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.47■■□□□ 1.03
POLR3DP05423 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.47■■□□□ 1.03
POLR3DP05423 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.47■■□□□ 1.03
POLR3DP05423 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
POLR3DP05423 KRT16P4-201ENST00000453883 522 ntBASIC21.47■■□□□ 1.03
POLR3DP05423 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
POLR3DP05423 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
POLR3DP05423 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms