Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 KRT18P24-201ENST00000344739 1156 ntBASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 MNT-208ENST00000575394 606 ntTSL 4 BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 CR559946.2-201ENST00000623684 991 ntBASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SPCS1Q9Y6A9 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
SPCS1Q9Y6A9 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.43
SPCS1Q9Y6A9 STK4-201ENST00000372801 2038 ntTSL 2 BASIC12.33□□□□□ -0.43
SPCS1Q9Y6A9 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.43
SPCS1Q9Y6A9 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
SPCS1Q9Y6A9 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
SPCS1Q9Y6A9 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.33□□□□□ -0.43
SPCS1Q9Y6A9 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 RARRES2P11-201ENST00000635158 484 ntBASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 CICP14-201ENST00000629111 2732 ntBASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SPCS1Q9Y6A9 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 AC092068.3-201ENST00000587894 2016 ntBASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 AL138688.1-201ENST00000624851 1594 ntBASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 FXN-202ENST00000396364 980 ntTSL 5 BASIC12.32□□□□□ -0.44
SPCS1Q9Y6A9 GRAMD4P7-201ENST00000578182 1232 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms