Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
HPS3Q969F9 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HPS3Q969F9 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.98■□□□□ 0.79
HPS3Q969F9 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HPS3Q969F9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HPS3Q969F9 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HPS3Q969F9 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HPS3Q969F9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HPS3Q969F9 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
HPS3Q969F9 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.98■□□□□ 0.79
HPS3Q969F9 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.98■□□□□ 0.79
HPS3Q969F9 RNF126P1-202ENST00000569893 925 ntBASIC19.98■□□□□ 0.79
HPS3Q969F9 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.98■□□□□ 0.79
HPS3Q969F9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HPS3Q969F9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.98■□□□□ 0.79
HPS3Q969F9 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
HPS3Q969F9 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
HPS3Q969F9 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HPS3Q969F9 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.98■□□□□ 0.79
HPS3Q969F9 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HPS3Q969F9 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
HPS3Q969F9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
HPS3Q969F9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
HPS3Q969F9 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.98■□□□□ 0.79
HPS3Q969F9 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.98■□□□□ 0.79
HPS3Q969F9 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
HPS3Q969F9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
HPS3Q969F9 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.97■□□□□ 0.79
HPS3Q969F9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HPS3Q969F9 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.97■□□□□ 0.79
HPS3Q969F9 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HPS3Q969F9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HPS3Q969F9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.97■□□□□ 0.79
HPS3Q969F9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HPS3Q969F9 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HPS3Q969F9 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
HPS3Q969F9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
HPS3Q969F9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
HPS3Q969F9 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HPS3Q969F9 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
HPS3Q969F9 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
HPS3Q969F9 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
HPS3Q969F9 AC006116.8-202ENST00000587620 1550 ntBASIC19.97■□□□□ 0.79
HPS3Q969F9 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
HPS3Q969F9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HPS3Q969F9 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.97■□□□□ 0.79
HPS3Q969F9 MIR662-201ENST00000384847 95 ntBASIC19.97■□□□□ 0.79
HPS3Q969F9 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.97■□□□□ 0.79
HPS3Q969F9 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
HPS3Q969F9 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.97■□□□□ 0.79
HPS3Q969F9 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HPS3Q969F9 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
HPS3Q969F9 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.97■□□□□ 0.79
HPS3Q969F9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
HPS3Q969F9 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HPS3Q969F9 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HPS3Q969F9 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
HPS3Q969F9 KRT18P55-202ENST00000578578 1546 ntBASIC19.97■□□□□ 0.79
HPS3Q969F9 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HPS3Q969F9 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.96■□□□□ 0.79
HPS3Q969F9 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.96■□□□□ 0.79
HPS3Q969F9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HPS3Q969F9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HPS3Q969F9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HPS3Q969F9 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HPS3Q969F9 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.96■□□□□ 0.79
HPS3Q969F9 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HPS3Q969F9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.96■□□□□ 0.79
HPS3Q969F9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HPS3Q969F9 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HPS3Q969F9 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
HPS3Q969F9 KRT18P48-201ENST00000434763 852 ntBASIC19.96■□□□□ 0.79
HPS3Q969F9 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.96■□□□□ 0.79
HPS3Q969F9 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.96■□□□□ 0.79
HPS3Q969F9 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.96■□□□□ 0.79
HPS3Q969F9 DUTP2-201ENST00000519164 463 ntBASIC19.96■□□□□ 0.79
HPS3Q969F9 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HPS3Q969F9 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.96■□□□□ 0.79
HPS3Q969F9 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.96■□□□□ 0.79
HPS3Q969F9 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.96■□□□□ 0.79
HPS3Q969F9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
HPS3Q969F9 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HPS3Q969F9 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HPS3Q969F9 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HPS3Q969F9 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
HPS3Q969F9 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.96■□□□□ 0.79
HPS3Q969F9 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HPS3Q969F9 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
HPS3Q969F9 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.96■□□□□ 0.79
HPS3Q969F9 LINC00896-202ENST00000609602 2128 ntBASIC19.96■□□□□ 0.79
HPS3Q969F9 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
HPS3Q969F9 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HPS3Q969F9 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HPS3Q969F9 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
HPS3Q969F9 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HPS3Q969F9 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HPS3Q969F9 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.95■□□□□ 0.78
HPS3Q969F9 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HPS3Q969F9 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HPS3Q969F9 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms